DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma6a

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_705941.2 Gene:psma6a / 171585 ZFINID:ZDB-GENE-020326-1 Length:246 Species:Danio rerio


Alignment Length:238 Identity:65/238 - (27%)
Similarity:122/238 - (51%) Gaps:10/238 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGS-TVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLD 68
            :||.:||:||:|.|.|||||.:|:.:|. |.:.:|..:..|:..:::....|.:...|..:..:.
Zfish     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVITQRKVPDKLLDSSTVTHLFRIT 73

  Fly    69 DHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSC 133
            :::....||:|||:|..|.||:.||.:.:..:.....|:.:.:.||.:.|.|||:...||.|...
Zfish    74 ENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCM 138

  Fly   134 LVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEIL--TIADEAAAIKHIVR 196
            :|.|.||:..|.:::.||:|.:..::|...|........::||...:.|  |...........:.
Zfish   139 IVVGVDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLEKKIKKKLDWTFDQTVETAISCLS 203

  Fly   197 TLVSVSSLNHTQMEVAVLKYRQP-LRM-----IDHQVLADLER 233
            |:::: ....:::|:.|:...:| .|:     ||..::|..||
Zfish   204 TVLAI-DFKPSELEIGVVTTEEPKFRILSESEIDTHLMALTER 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 58/212 (27%)
Ntn_hydrolase 5..214 CDD:294319 57/211 (27%)
psma6aNP_705941.2 PRK03996 6..239 CDD:235192 62/230 (27%)
proteasome_alpha_type_6 8..220 CDD:239723 57/211 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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