DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psmb8

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_034854.2 Gene:Psmb8 / 16913 MGIID:1346527 Length:276 Species:Mus musculus


Alignment Length:149 Identity:31/149 - (20%)
Similarity:67/149 - (44%) Gaps:15/149 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDHVVMTFSGLTADA 82
            :|:|.|     .|:|.:..:..:.:::.|:.| :.|.......:.|:..::.:::.|.||..||.
Mouse    65 VQIEMA-----HGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADC 124

  Fly    83 RILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLS--CLVGGFDEDGTPH 145
            :........|.:.:.|...:..:|...::.::.:...|      |..|||  .::.|:|:.| |.
Mouse   125 QYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQY------RGMGLSMGSMICGWDKKG-PG 182

  Fly   146 LFQTDPSGIFYEWRANTTG 164
            |:..|.:|.....:..:||
Mouse   183 LYYVDDNGTRLSGQMFSTG 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 31/149 (21%)
Psmb8NP_034854.2 proteasome_beta_type_5 73..260 CDD:239730 27/136 (20%)

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