DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and Psmb8

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_034854.2 Gene:Psmb8 / 16913 MGIID:1346527 Length:276 Species:Mus musculus


Alignment Length:149 Identity:31/149 - (20%)
Similarity:67/149 - (44%) Gaps:15/149 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDHVVMTFSGLTADA 82
            :|:|.|     .|:|.:..:..:.:::.|:.| :.|.......:.|:..::.:::.|.||..||.
Mouse    65 VQIEMA-----HGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADC 124

  Fly    83 RILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLS--CLVGGFDEDGTPH 145
            :........|.:.:.|...:..:|...::.::.:...|      |..|||  .::.|:|:.| |.
Mouse   125 QYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQY------RGMGLSMGSMICGWDKKG-PG 182

  Fly   146 LFQTDPSGIFYEWRANTTG 164
            |:..|.:|.....:..:||
Mouse   183 LYYVDDNGTRLSGQMFSTG 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 31/149 (21%)
Ntn_hydrolase 5..214 CDD:294319 31/149 (21%)
Psmb8NP_034854.2 PTZ00488 40..271 CDD:185666 31/149 (21%)
proteasome_beta_type_5 73..260 CDD:239730 27/136 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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