DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psmb5

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_002941560.1 Gene:psmb5 / 100379732 XenbaseID:XB-GENE-975048 Length:257 Species:Xenopus tropicalis


Alignment Length:126 Identity:25/126 - (19%)
Similarity:59/126 - (46%) Gaps:10/126 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQ 94
            |:|.:..:..:.:::.|:.| :.|.....:.|:|:..::.:::.|.:|..||..........:.:
 Frog    53 GTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCR 117

  Fly    95 SHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLS--CLVGGFDEDGTPHLFQTDPSG 153
            .:.|..::..:|...::.:|.:...|      :..|||  .::.|:|:.| |.|:..|..|
 Frog   118 IYELRNKERISVAAASKLLANMVYQY------KGMGLSMGTMICGWDKRG-PGLYYVDSEG 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 25/126 (20%)
psmb5XP_002941560.1 proteasome_beta_type_5 54..241 CDD:239730 24/125 (19%)

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