DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psmb11b

DIOPT Version :10

Sequence 1:NP_611920.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001268731.1 Gene:psmb11b / 100331481 ZFINID:ZDB-GENE-170530-2 Length:362 Species:Danio rerio


Alignment Length:219 Identity:41/219 - (18%)
Similarity:63/219 - (28%) Gaps:84/219 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTVMGLRTNNAIVIGVEKRS--VGDLQEERMVRKICMLDDHVVMTFSGLTADA----RILVSRA 89
            |:|.:|......::...:.||  .|.:..... .|:..:..|:|.|.||.:||.    |||....
Zfish   109 GTTTLGFAFQGGVIAAADTRSSCAGKVACPAS-PKVLPIHSHLVGTTSGTSADCALWKRILAREL 172

  Fly    90 QMEAQSHRLNF--------------------------------------EKPTTVEYITRYIAQL 116
            ::....||...                                      |:|.|..|....:...
Zfish   173 RLYQLRHRRRLSTGGAAKLLSHMLHPFKGTELCVAATLCGWDGDEDQDNEQPMTERYANTTLTSK 237

  Fly   117 KQN-----------------YTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTG 164
            ..:                 |..|:|.|..|....||    .|:|:.:.....|:  .|     |
Zfish   238 SSSQSAASSGLSGVRGPRVVYVCSDGLRLQGALFSVG----SGSPYAYSILDGGV--RW-----G 291

  Fly   165 RSSQPVRDYMEKHADEILTIADEA 188
            .|:|           |...:|.||
Zfish   292 MSAQ-----------EAAAVAREA 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_611920.1 Ntn_hydrolase 5..214 CDD:469781 41/219 (19%)
psmb11bNP_001268731.1 proteasome_beta_type_5 110..333 CDD:239730 40/218 (18%)

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