DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T2 and psma5

DIOPT Version :9

Sequence 1:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001096282.1 Gene:psma5 / 100124849 XenbaseID:XB-GENE-982653 Length:241 Species:Xenopus tropicalis


Alignment Length:239 Identity:81/239 - (33%)
Similarity:131/239 - (54%) Gaps:14/239 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDD 69
            |||.|..:||:|.|.|||||.||::.|||.:|::|:..:.:.||||....|.|...:.||..:|.
 Frog     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDA 72

  Fly    70 HVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNG-----RRPF 129
            |:....|||.|||:.|:.:|::|.|:|...:.:..|||.:|:.::.|...:.:.:.     .|||
 Frog    73 HIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPF 137

  Fly   130 GLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHI 194
            |::.|.||.||.| |.||..||||.|.:..|...|.:|:..:..:::...:.:|:.:   |||..
 Frog   138 GVALLFGGADEKG-PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKE---AIKSS 198

  Fly   195 VRTLVSV--SSLNHTQMEVAVLKYRQPLRMIDHQVLADLERTVR 236
            :..|..|  ..||.|.:|:|.:   :|.:........:||..::
 Frog   199 LTILKQVMEEKLNATNIELATI---EPGKKFHMYCKEELEEVIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 78/216 (36%)
Ntn_hydrolase 5..214 CDD:294319 78/215 (36%)
psma5NP_001096282.1 proteasome_alpha_type_5 8..220 CDD:239722 78/215 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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