DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KDR and Tie

DIOPT Version :10

Sequence 1:NP_002244.1 Gene:KDR / 3791 HGNCID:6307 Length:1356 Species:Homo sapiens
Sequence 2:NP_523928.1 Gene:Tie / 38559 FlyBaseID:FBgn0014073 Length:1233 Species:Drosophila melanogaster


Alignment Length:1105 Identity:243/1105 - (21%)
Similarity:388/1105 - (35%) Gaps:399/1105 - (36%)


- Green bases have known domain annotations that are detailed below.


Human   304 LYTCAASSGLMT---KKNSTFVRVHE--KPFVAFGSG-------MESLVEATVGERVRIPAKYLG 356
            |::..:|.||..   ::|.|...:.:  ||.| .|.|       ||..||....|..  |..|.|
  Fly   286 LFSDESSHGLFVVAKEQNGTLNHIADGTKPAV-MGKGIPSKTNSMEDDVEEEEDELK--PYVYFG 347

Human   357 YPPPEIKWYKNGIPLESNHTIKAG-----HVLTIMEVSERDTGNYTVILTN----PISKEKQSHV 412
            ...|.|:  ..|:      ||||.     |. .::|||...:...|:..|:    |:|..:    
  Fly   348 AKLPPIR--PGGL------TIKAAEGDDDHP-RVLEVSVAQSTTPTITTTSTTPAPVSSTR---- 399

Human   413 VSLVVYVPPQIGEKSLISPVD----SYQY-----GTTQTLTCTVYAIPPPHHIHWYWQLEEECAN 468
                    |....:..::||:    .|:|     |...|      |.|||             |.
  Fly   400 --------PTASTRRPLTPVERSRSKYKYHMRERGLVPT------AAPPP-------------AA 437

Human   469 EPSQAVSVTNPYPCEEWRSVEDFQGGNK-----------IEVNKNQFALIEGKNKTVSTLVIQAA 522
            .|:..||.|.            :.|..:           ::..:::.|      |.|...|:|..
  Fly   438 PPAPPVSRTR------------YVGSGRPTAGLSDSIQDLKQTESEVA------KPVVRRVVQKV 484

Human   523 NVSA-------LYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFEN 580
            :.|:       :...|....||:.|.:.:...|.....|...:...|...:.:...|...||.:.
  Fly   485 SPSSSTPLIITVLSAEEETTVGQTEALPTDESTTTTSTTTTTEKPSTTTSTSTTTTTPVPSTSKR 549

Human   581 LTWYKLGPQPLPIHVGELPTPVCK----NLDTLWKLNATMFSNSTNDILIME------------- 628
            .|      ...|:.....||....    :..|....:.|:...:|....|:|             
  Fly   550 TT------TNAPLSTTNTPTTTTSSTTPSTTTTSSTSTTVIPTTTKANSIIEKDKELIRALGPAL 608

Human   629 LKNASLQDQGDYVCLAQD---------RKTKKRHCV-----VRQLTVLERVAPTITGNLENQTTS 679
            .:..::.|..:.:....:         .:|:..|..     :.:.|||..:..|:    ..:.||
  Fly   609 TREINIDDANNLIVFCNNTSDCGVTPRTQTQPSHTTDSSPKILRTTVLTSIRSTV----HPRPTS 669

Human   680 IGESIEVSCTASGNPPPQIMWFKDNET---LVEDSG----------IVLKDGNRNLTIRRVRKED 731
            ...:...:.||    ||.:. ...||.   :||.|.          ::..:.:.|:.:||:    
  Fly   670 TSTTTSTTTTA----PPAVT-APSNEVYIGIVESSSSASPADISSTVIANERDLNMEMRRM---- 725

Human   732 EGLYTCQACSVLGCAKVEAFFIIEGAQEKTNLEIIILVGTAVI---AMFFWLLLVIILRTVKRAN 793
                                          ||..::||...||   |:..:|:...::|  :||.
  Fly   726 ------------------------------NLVTLVLVAVGVIPLAAIILYLVRNFVIR--RRAK 758

Human   794 GGE--------------LKTGYLSIVMDPDELPLD-------------------EHCERLPYD-- 823
            ..|              :|.......:|.||..:|                   :|.:.:|..  
  Fly   759 QSEVFDVCITDQQPISPVKKVDSKYQVDDDEDEVDHQHHQHMQHHQNHQNHQNHQHHQAMPMSQA 823

Human   824 -------------------ASKW-EFPRDRLKLGKPLGRGAFGQVIEADA------FGIDKTATC 862
                               ||:: :|.|..::|...||.|.||||.:|:|      ||    || 
  Fly   824 SQRDANHNRYGNNDDKTSLASEFHDFERSNIRLKSLLGEGNFGQVWKAEADDLSGHFG----AT- 883

Human   863 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 927
            |.||||.::   ..|...:|..|..|:..:|.|.|||.|||||.: ..|.|:|:|:...|.|.:.
  Fly   884 RIVAVKTIR---ACSAQVSLKDEANIMRKLGSHQNVVTLLGACVE-SEPHMLIMEYAMRGRLLSL 944

Human   928 LRSKRN--EFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 990
            ||:.|:  ..:|....|.|                                     ||       
  Fly   945 LRAARSATNILPASVPGGR-------------------------------------SL------- 965

Human   991 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 1055
            ||       |:...|..::..:|.|||::|.|:.:||||||||:||....:.||||||::.|:  
  Fly   966 AP-------LSPRTLAGFALDIACGMEYIAGRRIVHRDLAARNVLLDHNGMCKICDFGMSIDL-- 1021

Human  1056 DPDYVRK--------------------------------------------------GDAR---- 1066
            |.:.:||                                                  |:.:    
  Fly  1022 DAERMRKEQEKNAANDLMRHNAHKFKFDFGSRYILQHWQHTFGQGQGQGHCSKDQPHGEKKSHHG 1086

Human  1067 ---------LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 1122
                     ||::|||||::...::|.::|:|:||::||||.:||::||..: ...|..||:.:|
  Fly  1087 HDTIGKRHALPIRWMAPESLQYHMFTTETDIWAFGIVLWEIATLGSTPYSQL-TGREVIRRVPQG 1150

Human  1123 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD--GKDYI-VLPISETL 1184
            .|...|..:..|.|..|..|||.||..||:|::....:...|......|  ..||: |...||.|
  Fly  1151 LRPDLPKESRHEFYNLMSRCWHKEPHMRPSFAQSRLEITRSLHKWVDDDSAASDYMDVSGFSEDL 1215

Human  1185  1184
              Fly  1216  1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KDRNP_002244.1 IgI_VEGFR 224..326 CDD:409448 6/24 (25%)
Ig strand A 224..228 CDD:409448
Ig strand A' 234..238 CDD:409448
Ig strand B 240..249 CDD:409448
Ig strand C 256..261 CDD:409448
Ig strand C' 264..266 CDD:409448
Ig strand D 270..278 CDD:409448
Ig strand E 286..294 CDD:409448
Ig strand F 304..310 CDD:409448 1/5 (20%)
Ig strand G 315..321 CDD:409448 1/8 (13%)
IgI_VEGFR-2 329..417 CDD:409450 26/103 (25%)
Ig strand A 329..332 CDD:409450 1/2 (50%)
Ig strand A' 339..343 CDD:409450 2/3 (67%)
Ig strand B 345..356 CDD:409450 3/10 (30%)
Ig strand C 360..366 CDD:409450 2/5 (40%)
Ig strand C' 368..371 CDD:409450 1/2 (50%)
Ig strand D 376..379 CDD:409450 2/2 (100%)
Ig strand E 381..386 CDD:409450 1/4 (25%)
Ig strand F 394..402 CDD:409450 1/7 (14%)
Ig strand G 408..417 CDD:409450 0/8 (0%)
IG_like 565..661 CDD:214653 15/126 (12%)
I-set 667..754 CDD:400151 15/99 (15%)
Ig strand B 684..688 CDD:409353 0/3 (0%)
Ig strand C 697..701 CDD:409353 0/3 (0%)
Ig strand E 720..724 CDD:409353 1/3 (33%)
Ig strand F 734..739 CDD:409353 0/4 (0%)
VEGFR-2_TMD 759..793 CDD:375470 10/36 (28%)
PTKc_VEGFR2 826..1167 CDD:270681 118/412 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1274..1318
TieNP_523928.1 TyrKc 854..1183 CDD:197581 115/391 (29%)
Blue background indicates that the domain is not in the aligned region.

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