DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ssl and csnk2b

DIOPT Version :9

Sequence 1:	NP_523848.2	Gene:	Ssl / 37909	FlyBaseID:	FBgn0015300	Length:	219	Species:	Drosophila melanogaster
Sequence 2:	NP_001005081.1	Gene:	csnk2b / 448656	XenbaseID:	XB-GENE-487924	Length:	215	Species:	Xenopus tropicalis

Alignment Length:	207	Identity:	98/207 - (47%)
Similarity:	128/207 - (61%)	Gaps:	20/207 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 SWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGLEFD----SQTLEVVLDPEFDNE------DWDCA 67
            |||.||.|::|:||.|.|..:|||||||||||...    .|.|:::||.|.|.|      ..|..
Frog     8 SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLI 72

  Fly    68 EE--KKLYGMIHARYIVSPRGIEDMRLKYERGDFGSCPRVFCKRQKVLPVGLHDVWDKAQVKIYC 130
            |:  :.|||:||||||::.|||..|..||::||||.||||:|:.|.:||:||.|:..:|.||:||
Frog    73 EQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYC 137

  Fly   131 PSCNNVYIPLP---HNGMLDGAMFGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHKKALMPP 192
            |.|.:||.|..   |:  .|||.|||.||||.||..|...|..|..:::||:|||::|..|....
Frog   138 PKCMDVYTPKSSRHHH--TDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQ 200

  Fly   193 ESAES---PPIK 201
            ..|.|   .|:|
Frog   201 LQAASNFKSPVK 212

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ssl	NP_523848.2	CK_II_beta	13..183	CDD:198153	91/184 (49%)
csnk2b	NP_001005081.1	CK_II_beta	8..191	CDD:198153	91/184 (49%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53662
OrthoDB	1	1.010	-	-		D1335521at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11740
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.030