DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13579 and gpr84

DIOPT Version :10

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001072335.1 Gene:gpr84 / 779788 XenbaseID:XB-GENE-491098 Length:374 Species:Xenopus tropicalis


Alignment Length:429 Identity:89/429 - (20%)
Similarity:152/429 - (35%) Gaps:116/429 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NSSCSHPRYSGHNFIAHIGIAETIEAVLILVLTLGVIGANCLVIFVINNRRYAAYIHQQPRY--L 78
            |.||..|....|.:   .|:  |...|:.||.|:|    |.|.:..     ||.....|.|:  |
 Frog     7 NFSCYDPSIVEHRY---FGV--TWGIVVSLVGTIG----NVLTVLA-----YALDKKLQTRFNLL 57

  Fly    79 LTSLALNDLTIGLLITPFGLMPALFHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCAL 143
            :.:|:|.|:.....:.||.:...|...|..|..||::..:|....:..|.:.|..:||.||:...
 Frog    58 IVNLSLADILYCTFLQPFSVDSYLHLYWRSGTTFCRVFGMLLFVSNSVSILNLCLIAVSRYILIA 122

  Fly   144 HPRRYYQHSSKKGCVAILSLTWIISLTVFG-----FLVLPKGYYFNNTGLMACEPFY---SKPSY 200
            :.:.:.:...:.|...||..||:|....|.     |:::||        :..|. |:   .:|..
 Frog   123 NNKLFDKIFCRLGVSLILLGTWVIGFASFAPLWYVFVLVPK--------VCTCS-FHRIKGRPYT 178

  Fly   201 RILSTCALYFPTTMVLMYCYGSSFHMSRFRLNDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQQ- 264
            .||  .|.||   ::.:.|.|..:.:...::.                   :|||.|..::.:. 
 Frog   179 TIL--MAFYF---VIGLSCVGVFYFLIHRKVK-------------------SAAQALDQYKLKTK 219

  Fly   265 ----------HHQQAGMHSHLYHG----------HSHHPSHPSHPNHPNHHGHPHHHGPPVMGHL 309
                      :....|.:..:..|          ..|.||:.|                      
 Frog   220 NTTKENVSGINSTDVGKYQDMDSGVDTAVSSEVISEHLPSNKS---------------------- 262

  Fly   310 SMAMSMGLAGMPNMTNKITKKIVPIQEKNSSGS----TSRSMAAISLGFIVMVTPWTIQEIVTAC 370
              .....:....|...|:.::  .:.:...|||    .:|....:.:.|:|...|:.:..|..| 
 Frog   263 --TSQSAVTSHANDNEKLERR--TLSQPKDSGSDFKKVTRMCFVVFIFFVVSYIPFLLLNIFDA- 322

  Fly   371 TGSKLPPFLDFL---VTWTALSNSLWNPFMYWLLNSDFR 406
             .:..|..|..:   :||.   ||..||.:|..:|..||
 Frog   323 -KNSAPQMLHMIAANLTWL---NSCINPILYAAMNRQFR 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 47/188 (25%)
TM helix 1 41..65 CDD:410626 7/23 (30%)
TM helix 2 75..101 CDD:410626 7/27 (26%)
TM helix 3 113..143 CDD:410626 8/29 (28%)
TM helix 4 156..175 CDD:410626 7/23 (30%)
TM helix 5 200..220 CDD:410626 5/19 (26%)
7tm_GPCRs <334..407 CDD:475119 21/80 (26%)
TM helix 6 340..366 CDD:410628 7/29 (24%)
TM helix 7 377..402 CDD:410628 8/27 (30%)
gpr84NP_001072335.1 7tmA_GPR84-like 20..360 CDD:320338 84/416 (20%)
TM helix 1 21..47 CDD:320338 11/36 (31%)
TM helix 2 54..77 CDD:320338 6/22 (27%)
TM helix 3 92..122 CDD:320338 8/29 (28%)
TM helix 4 136..154 CDD:320338 6/17 (35%)
TM helix 5 174..199 CDD:320338 8/29 (28%)
TM helix 6 291..321 CDD:320338 6/29 (21%)
TM helix 7 328..353 CDD:320338 8/27 (30%)

Return to query results.
Submit another query.