DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13579 and Uts2r

DIOPT Version :9

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_065412.1 Gene:Uts2r / 57305 RGDID:621884 Length:386 Species:Rattus norvegicus


Alignment Length:475 Identity:88/475 - (18%)
Similarity:155/475 - (32%) Gaps:168/475 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NSSCSHPRYSGHNFIAHIGIAETIEAVLILVLTLGVIGANCLVIFVINNRRYAA--YIHQQPRYL 78
            |||.|.|  :..:.:..:.....|.|||..:..:|::|....::.:....|.:|  |::      
  Rat    33 NSSWSGP--TDPSSLKDLVATGVIGAVLSAMGVVGMVGNVYTLVVMCRFLRASASMYVY------ 89

  Fly    79 LTSLALNDLTIGLLITPFGLMPALFHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCAL 143
            :.:|||.|| :.||..||.:...:...|.:|::.|::...|.......|...|..|:.:||...|
  Rat    90 VVNLALADL-LYLLSIPFIIATYVTKDWHFGDVGCRVLFSLDFLTMHASIFTLTIMSSERYAAVL 153

  Fly   144 HPRRYYQHSSKKGCVAILSL-TWIISLTVFGFLVLPKGYYFNNTGLMA-----------CEPFYS 196
            .|....|.|  ||...:|.| ||:::|    .|.||.        ::|           |.|.:.
  Rat   154 RPLDTVQRS--KGYRKLLVLGTWLLAL----LLTLPM--------MLAIQLVRRGSKSLCLPAWG 204

  Fly   197 KPSYRILSTCALYFPTTMVLMYCYGSSFHMSRFRLNDPTMPLTAAAHHPHPHPHPTAAQQLQMHQ 261
            ..::|...|  |.|.|::|                                              
  Rat   205 PRAHRTYLT--LLFGTSIV---------------------------------------------- 221

  Fly   262 HQQHHQQAGMHSHLYHGHSHHPSHPSHPNHPNHHGHPHHHGPP-VMGHLSMAMSMGLAGMPNMTN 325
                                                    ||. |:|.|.:.::.........:.
  Rat   222 ----------------------------------------GPGLVIGLLYVRLARAYWLSQQASF 246

  Fly   326 KITKKIVPIQEKNSSGSTSRSMAAISLGFIVM-----VTPWTIQEIVTACTGSKLPP----FLDF 381
            |.|:::           .:..:..:.||.:::     :..|..|.:........|.|    .:::
  Rat   247 KQTRRL-----------PNPRVLYLILGIVLLFWACFLPFWLWQLLAQYHEAMPLTPETARIVNY 300

  Fly   382 LVTWTALSNSLWNPFMYWLLNSDFRRMSR-----------------QLMPNKCFPHEDTPEHKSG 429
            |.|.....||..|||:|.||..::|...|                 ..:|::....:|     ||
  Rat   301 LTTCLTYGNSCINPFLYTLLTKNYREYLRGRQRSLGSSCHSPGSPGSFLPSRVHLQQD-----SG 360

  Fly   430 CCHINANDFEITTLPIPPEP 449
            ....:::.....||.:.|.|
  Rat   361 RSLSSSSQQATETLMLSPVP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_4 51..>148 CDD:304433 24/98 (24%)
Uts2rNP_065412.1 7tmA_UII-R 54..328 CDD:320130 74/393 (19%)
TM helix 1 54..78 CDD:320130 6/23 (26%)
TM helix 2 87..108 CDD:320130 10/27 (37%)
TM helix 3 124..146 CDD:320130 4/21 (19%)
TM helix 4 168..184 CDD:320130 7/19 (37%)
TM helix 5 209..232 CDD:320130 11/110 (10%)
TM helix 6 258..280 CDD:320130 3/21 (14%)
TM helix 7 296..321 CDD:320130 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24230
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.