DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13579 and kiss1ra

DIOPT Version :10

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001099149.2 Gene:kiss1ra / 561898 ZFINID:ZDB-GENE-070912-521 Length:366 Species:Danio rerio


Alignment Length:440 Identity:86/440 - (19%)
Similarity:149/440 - (33%) Gaps:149/440 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLLVAPAVKNSSCSHPRYSGHNFIAHIGIAETIEAVLILVLTLGVIGANCLVIFVINNRRYAAYI 71
            |.|:..:.:|||........|.|:..   |..:.....|::.:|:|| |.|||:||:.       
Zfish    10 SELLNGSFRNSSMEDSEDGEHPFLTD---AWLVPLFFSLIMLVGLIG-NSLVIYVISK------- 63

  Fly    72 HQQPR----YLLTSLALNDLTIGLLITPFGLMPALFHCWPYGEIFCQIQALLRGALSQQSAVILV 132
            |:|.|    :.:.:||..|:...|...||.........|.:|:..|:..|.|:....|.:.:.|.
Zfish    64 HRQMRTATNFYIANLAATDIIFLLCCVPFTATLYPLPGWIFGDFMCKFVAFLQQVTVQATCITLT 128

  Fly   133 CMAVDRYMCALHPRRYYQHSSKKGCVAILSLTW----IISLTVFGFLVLPKGYYFNNTGLMACEP 193
            .|:.||....::|.:...|.:.:..:.:....|    |:|:.:|.:..|..||:: .......|.
Zfish   129 AMSGDRCYVTVYPLKSLHHRTPRVAMIVSICIWIGSFILSIPIFLYQRLEDGYWY-GPRKYCMER 192

  Fly   194 FYSK---PSYRILSTCALYFPTTMVLMYCYGSSFHMSRFRLNDPTMPLTAAAHHPHPHPHPTAAQ 255
            |.||   .::.:....|:|....:.:.:||  ||.:.|.                          
Zfish   193 FPSKTHEKAFILYQFIAVYLLPVITISFCY--SFMLKRV-------------------------- 229

  Fly   256 QLQMHQHQQHHQQAGMHSHLYHGHSHHPSHPSHPNHPNHHGHPHHHGPPVMGHLSMAMSMGLAGM 320
                       .||.:                .|...||..|                       
Zfish   230 -----------GQASV----------------EPVDNNHQVH----------------------- 244

  Fly   321 PNMTNKITKKIVPIQEKNSSGSTSRSMAAISLGFIVMVTPWTIQEIVTACTGSKLPPFLDFLV-- 383
                 .::::.:.|:.|            ||...:|:|..:||      |.|    |...|::  
Zfish   245 -----LLSERTISIRSK------------ISKMVVVIVVLFTI------CWG----PIQIFVLFQ 282

  Fly   384 ----------------TWT---ALSNSLWNPFMYWLLNSDFRRMSRQLMP 414
                            ||.   :.:||..||.:|..:.:.||:..|:..|
Zfish   283 SFYPNFKANYATYKIKTWANCMSYANSSINPIVYGFMGASFRKSFRKTFP 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 44/189 (23%)
TM helix 1 41..65 CDD:410626 10/23 (43%)
TM helix 2 75..101 CDD:410626 7/29 (24%)
TM helix 3 113..143 CDD:410626 8/29 (28%)
TM helix 4 156..175 CDD:410626 4/22 (18%)
TM helix 5 200..220 CDD:410626 2/19 (11%)
7tm_GPCRs <334..407 CDD:475119 20/93 (22%)
TM helix 6 340..366 CDD:410628 6/25 (24%)
TM helix 7 377..402 CDD:410628 9/45 (20%)
kiss1raNP_001099149.2 7tmA_KiSS1R 37..327 CDD:320223 76/403 (19%)
TM helix 1 38..64 CDD:320223 10/33 (30%)
TM helix 2 71..97 CDD:320223 6/25 (24%)
TM helix 3 109..139 CDD:320223 8/29 (28%)
TM helix 4 151..171 CDD:320223 3/19 (16%)
TM helix 5 199..228 CDD:320223 6/30 (20%)
TM helix 6 252..282 CDD:320223 12/51 (24%)
TM helix 7 295..320 CDD:320223 7/24 (29%)

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