DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13579 and Oamb

DIOPT Version :9

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:702 Identity:131/702 - (18%)
Similarity:216/702 - (30%) Gaps:237/702 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 AETIEAVLILVLTLGVIGANCLVIFVI--NNRRYAAYIHQQPRYLLTSLALNDLTIGLLITPFGL 98
            |..|...::..:.:.|||.|||||..:  :|:     :.....:.:.:||:.||.:||.:.||..
  Fly    19 ANLISLAVLEFINVLVIGGNCLVIAAVFCSNK-----LRSVTNFFIVNLAVADLLVGLAVLPFSA 78

  Fly    99 MPALFHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSKKGCVAILSL 163
            ...:|..|.:|:::|:|...:...:...|.:.|..:::|||:....|..|....|.|...::::.
  Fly    79 TWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAG 143

  Fly   164 TWIISLTV-FGFLV------------LPKG---YYFNNT---------GLMACE----------- 192
            .|::|..: |..||            .|||   .|:..|         ||.:.:           
  Fly   144 IWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSP 208

  Fly   193 --------------------------------------------------------------PFY 195
                                                                          |..
  Fly   209 PHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQ 273

  Fly   196 SKP-----------------SYRILSTCALYFPTTMVLMYCY----------------------- 220
            ::|                 .|.:.|....::....|:::.|                       
  Fly   274 NRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKG 338

  Fly   221 ----GSSFHMSRFRL----------------NDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQQ- 264
                ||.|...|..|                |..|...|.....|.|......|.: ::|.|.: 
  Fly   339 SKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATR-RLHHHDKI 402

  Fly   265 -----HHQQAGMHSHLYHGHSHHPSHPS-------HPNHPNH--------HGHPHHHG------- 302
                 :.....:.....||...|....|       |.|..|.        :.....||       
  Fly   403 KISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYL 467

  Fly   303 ------PPVMGHLSMAMSMGLAGMPNMTN-KITKKIVPIQEKNSSGST--SRSMAAISLGFIVMV 358
                  |.:....|.....|.:|.....| |:.::.:..|.|.....|  ::::|.|...||...
  Fly   468 QVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCW 532

  Fly   359 TPWTIQEIVTACTGSKLPPFLDFLVTWTALSNSLWNPFMYWLLNSDFRRMSRQLMPNKCFPHEDT 423
            .|:....|:.......:.|.|..::.|....||..||.:|.|.:.|||...:::: .:||....:
  Fly   533 CPFFTMYIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII-CRCFCSRQS 596

  Fly   424 PEHKSGCCHINANDFEITTLPIPPEPPSSRPPGGAGGGGG------------------GPSSGGP 470
            ...||     :....:::.:.|....||..|...|...|.                  ||||...
  Fly   597 VSLKS-----SRRGSDMSAIRIRARTPSITPSAAAHSFGDESELHHSEMSNDPRXRSFGPSSSSQ 656

  Fly   471 SSGGGV-ASSIGGSVLGICG--------RSRTNSLS-RSASQYIRGTMGGGV 512
            ||.||: .:|:...|..||.        .|...:.| .|||..:.|..||.|
  Fly   657 SSLGGLRKTSLKVPVYEICHPLVMETACYSYVEATSDGSASCSVAGGNGGSV 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_4 51..>148 CDD:304433 28/98 (29%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 33/129 (26%)
7tm_1 37..>181 CDD:278431 37/148 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460605
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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