DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13579 and AstA-R2

DIOPT Version :10

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster


Alignment Length:163 Identity:43/163 - (26%)
Similarity:71/163 - (43%) Gaps:11/163 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AVKNSSCSHPRYSGHNFIAHIGIAETIEAVLILVLTLGVIGANCLVIFVI---NNRRYAAYIHQQ 74
            |.:|.......::...::|..|....|......|:.:.....|.|||.|:   ||.|....:   
  Fly    14 ATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNL--- 75

  Fly    75 PRYLLTSLALNDLTIGLLITPFGLMPALFHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRY 139
               ::.:||..||...:|..||.....:.:.||||..:|:....|....:..|...||.|::||:
  Fly    76 ---MIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRF 137

  Fly   140 MCALHP-RRYYQHSSKKGCVAILSLTWIISLTV 171
            :..:|| |.....:.....:||::| ||:.|.|
  Fly   138 LAVVHPIRSRMMRTENITLIAIVTL-WIVVLVV 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 38/135 (28%)
TM helix 1 41..65 CDD:410626 7/26 (27%)
TM helix 2 75..101 CDD:410626 7/25 (28%)
TM helix 3 113..143 CDD:410626 8/29 (28%)
TM helix 4 156..175 CDD:410626 7/16 (44%)
TM helix 5 200..220 CDD:410626
7tm_GPCRs <334..407 CDD:475119
TM helix 6 340..366 CDD:410628
TM helix 7 377..402 CDD:410628
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 39/138 (28%)
TM helix 1 40..66 CDD:320224 7/25 (28%)
TM helix 2 73..99 CDD:320224 7/31 (23%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 7/18 (39%)
TM helix 5 204..233 CDD:320224
TM helix 6 249..279 CDD:320224
TM helix 7 292..317 CDD:320224
Blue background indicates that the domain is not in the aligned region.

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