DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13579 and CrzR

DIOPT Version :10

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001261755.1 Gene:CrzR / 39409 FlyBaseID:FBgn0036278 Length:644 Species:Drosophila melanogaster


Alignment Length:730 Identity:133/730 - (18%)
Similarity:221/730 - (30%) Gaps:297/730 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVAPAVKNSSCSHPRYSGHNF-----------------IAHIGIAET-IEAVLILVLTLGVIGAN 55
            |.|.|:.|||......|.|..                 ::..|:.:. :.||:.|...||    |
  Fly    76 LPAYAISNSSSLAHTNSRHEAPPMAEQVPEHVMDHAPQLSRSGLLKVYVLAVMALFSLLG----N 136

  Fly    56 CLVIFVI--------NNRRYAAYIHQQPRYLLTSLALNDLTIGLLITPFGLMPALFHC----WPY 108
            .|.|:.|        |:|...:.|:.    |:..|::.|    :|:|.|.::.....|    |..
  Fly   137 LLTIWNIYKTRISRRNSRHTWSAIYS----LMFHLSIAD----VLVTWFCIIGEAAWCYTVQWLA 193

  Fly   109 GEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSKKGCVAILSLTWIISLTVFG 173
            .|:.|::..|.:......|..:||.:.|||::...:|.:  ..:..|.|..:|..|:|:||.   
  Fly   194 NELTCKLVKLFQMFSLYLSTYVLVLIGVDRWIAVKYPMK--SLNMAKRCHRLLGGTYILSLV--- 253

  Fly   174 FLVLPKGYYFNNTGLMACEPFYSKPSY---------RILSTCALYFPTTMVLMYCYGSSFHMSRF 229
             |.||:.:.|:.......|.||...::         ::.:|..|.|  |.:|..|.....:||.|
  Fly   254 -LSLPQFFIFHVARGPFVEEFYQCVTHGFYTADWQEQMYATFTLVF--TFLLPLCILFGTYMSTF 315

  Fly   230 RLNDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQQHHQQAGMHSHLYHGHSHHPSHPSHPNHPNH 294
            |                     |.:...:|.|.                                
  Fly   316 R---------------------TISSSEKMFQG-------------------------------- 327

  Fly   295 HGHPHHHGPPVMGHLSMAMSMGLAGMPNMTNKITKKIVPIQEKNSSGSTSRSMAAISLGFIVMVT 359
                           |...:...|.:|..||:  ::::    ..:...:.|....|.:.|::..|
  Fly   328 ---------------SKLANYSTAKLPTQTNR--QRLI----HKAKMKSLRISVVIIIAFLICWT 371

  Fly   360 PWTIQEIVTACTG--SKLPPFLDFLVTWTALSNSLWNPFMYWLLNSDFRRMSRQLMPNKCFPHED 422
            |:.:..|:.....  .:|...|...:.:..:||||.||.:|                        
  Fly   372 PYYVMMIMFMFLNPDKRLGDDLQDAIFFFGMSNSLVNPLIY------------------------ 412

  Fly   423 TPEHKSGCCHINANDFEITTLPIPPEPPSSRPPGGAGGGGGGPSSGGPSSGGGVASSIGGSVLGI 487
                  |..|:                              .|..||.|||||            
  Fly   413 ------GAFHL------------------------------CPGKGGKSSGGG------------ 429

  Fly   488 CGRSRTNSLSRSASQYIRGTMGGGVHNHQATETFSTTRPDIEGLSEKYWGEILERTVSSGNLNAM 552
             |.:...||:|..|              |.|.:..|....::|              :.|:    
  Fly   430 -GNNNAYSLNRGDS--------------QRTPSMLTAVTQVDG--------------TGGS---- 461

  Fly   553 QKHLPPHLPYAHHLVHQIHQPQQHHQQQTTSFSKASDLQLNLNLSQAATAA----ELGKFSNSEP 613
                                     .:|..:|.:.|..:.:.|.:....||    ::|       
  Fly   462 -------------------------SRQMRAFRQQSYYRSSSNGTAGPGAAPFKEQVG------- 494

  Fly   614 KLCEHLFHDVNCAKSKAANGDGESSGKLACGRSIPDIXYAEDVILAKNQLLARQAKCSHHPLHQQ 678
                 |.|        ...|:|...|.::.|.:       ..:|...:.|||||..|.....|||
  Fly   495 -----LLH--------VGPGNGTPGGSVSSGAT-------PQLIRKGSALLARQPSCLREQEHQQ 539

  Fly   679 AKTRLHSHTGSLRFS 693
             :..||....:|..|
  Fly   540 -RLLLHEKPSTLVLS 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 49/199 (25%)
TM helix 1 41..65 CDD:410626 10/31 (32%)
TM helix 2 75..101 CDD:410626 6/25 (24%)
TM helix 3 113..143 CDD:410626 8/29 (28%)
TM helix 4 156..175 CDD:410626 6/18 (33%)
TM helix 5 200..220 CDD:410626 5/28 (18%)
7tm_GPCRs <334..407 CDD:475119 15/74 (20%)
TM helix 6 340..366 CDD:410628 5/25 (20%)
TM helix 7 377..402 CDD:410628 8/24 (33%)
CrzRNP_001261755.1 7tmA_GnRHR_invertebrate 119..419 CDD:320506 79/453 (17%)
TM helix 1 120..146 CDD:320506 9/29 (31%)
TM helix 2 160..187 CDD:320506 7/34 (21%)
TM helix 3 198..228 CDD:320506 8/29 (28%)
TM helix 4 239..260 CDD:320506 9/24 (38%)
TM helix 5 288..317 CDD:320506 10/51 (20%)
TM helix 6 350..380 CDD:320506 6/29 (21%)
TM helix 7 391..416 CDD:320506 9/54 (17%)

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