DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13579 and DopEcR

DIOPT Version :10

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_647897.2 Gene:DopEcR / 38539 FlyBaseID:FBgn0035538 Length:322 Species:Drosophila melanogaster


Alignment Length:389 Identity:85/389 - (21%)
Similarity:128/389 - (32%) Gaps:135/389 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EAVLILVLTLGVIGANCLVIFVINNRRYAAYIHQQPRYLLTSLALNDLTIGLLITPFGLMPALFH 104
            :||||.:|.:.::.:|.|:|....|.:....:   ..|.|.|||:.||..|||:.||.:.|||..
  Fly    18 KAVLISILGVAIVLSNLLIIATYANFKGPTEV---INYYLLSLAIADLLCGLLVVPFSVYPALTG 79

  Fly   105 CWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSKKGCVAILSLTWIISL 169
            .|.||:|.|:....|...|...|....:.::||||:....|.||....:|..|...:..|||   
  Fly    80 EWMYGDIVCRFTGYLEVTLWAVSVYTFMWISVDRYLAVRKPLRYETVQTKTRCQCWMVFTWI--- 141

  Fly   170 TVFGFLVLPKGYYFNNTGLMACEPF--YSKP-----------------SYRILSTCALYFPTTMV 215
                           :..|:.|.|.  ||.|                 :|.......:..|:.:.
  Fly   142 ---------------SAALLCCPPILGYSMPIENNMTHICMLDWGNMAAYSATLAILVLGPSLIS 191

  Fly   216 LMYCYGSSFHMSR-FRLNDPTMPLTAAAHHPHPHPHPTA-AQQLQMHQHQQHHQQAGMHSHLYHG 278
            :::.||..|.|.| .|..:|.          |...:.|| |:.|                     
  Fly   192 IVHNYGYIFVMMRKIRSGEPI----------HDKEYATALAENL--------------------- 225

  Fly   279 HSHHPSHPSHPNHPNHHGHPHHHGPPVMGHLSMAMSMGLAGMPNMTNKITKKIVPIQEKNSSGST 343
                 |:|||                       .||.                            
  Fly   226 -----SNPSH-----------------------MMSF---------------------------- 234

  Fly   344 SRSMAAISLGFIVMVTPWTIQEIVTACTGSKL-PPFLDFLVTWTALSNSLWNPFMYWLLNSDFR 406
                 |:...|.|...||.:..:....||..: ...::|.|.|..:.||.|...:...::..||
  Fly   235 -----ALVFAFWVSWLPWILLRLYEVVTGDVIQSTLINFAVVWIGILNSFWKILIMTSMSPQFR 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 52/197 (26%)
TM helix 1 41..65 CDD:410626 8/23 (35%)
TM helix 2 75..101 CDD:410626 12/25 (48%)
TM helix 3 113..143 CDD:410626 8/29 (28%)
TM helix 4 156..175 CDD:410626 4/18 (22%)
TM helix 5 200..220 CDD:410626 2/19 (11%)
7tm_GPCRs <334..407 CDD:475119 15/74 (20%)
TM helix 6 340..366 CDD:410628 5/25 (20%)
TM helix 7 377..402 CDD:410628 6/24 (25%)
DopEcRNP_647897.2 7tm_classA_rhodopsin-like 18..289 CDD:410626 83/383 (22%)
TM helix 1 18..43 CDD:410626 8/24 (33%)
TM helix 2 50..76 CDD:410626 12/25 (48%)
TM helix 3 88..118 CDD:410626 8/29 (28%)
TM helix 4 131..150 CDD:410626 6/36 (17%)
TM helix 5 173..198 CDD:410626 3/24 (13%)
TM helix 6 224..254 CDD:410626 12/111 (11%)
TM helix 7 264..289 CDD:410626 6/24 (25%)

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