DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13579 and mAChR-A

DIOPT Version :10

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster


Alignment Length:746 Identity:147/746 - (19%)
Similarity:236/746 - (31%) Gaps:215/746 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PRYSGHNFIAHIGIAETIEAVLILVLTLGVIGANCLVI--FVINNRRYAAYIHQQPRYLLTSLAL 84
            ||||    :|.:.:...:.|:|..|...|    |.:|:  |.|:.:     :.....|.|.|||:
  Fly    97 PRYS----LASMVVMGFVAAILSTVTVAG----NVMVMISFKIDKQ-----LQTISNYFLFSLAI 148

  Fly    85 NDLTIGLLITPFGLMPALFHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYY 149
            .|..||.:..|...:..:...||.|.|.|.....|....|..|.:.|:.::.|||.....|..|.
  Fly   149 ADFAIGAISMPLFAVTTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYR 213

  Fly   150 QHSSKKGCVAILSLTWIISLTVF-----------GFLVLPKGYYFNNTGLMACEPFYSKPSYRIL 203
            ...:......::...|.|||.::           |...:||...:..        |.....|...
  Fly   214 AKRTTNRAAVMIGAAWGISLLLWPPWIYSWPYIEGKRTVPKDECYIQ--------FIETNQYITF 270

  Fly   204 ST--CALYFPTTMVLMYCYGSSFHMSRFRLNDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQQHH 266
            .|  .|.|||.| ::.:.|...:..::.|..|  :|...|..........::.:...:     :|
  Fly   271 GTALAAFYFPVT-IMCFLYWRIWRETKKRQKD--LPNLQAGKKDSSKRSNSSDENTVV-----NH 327

  Fly   267 QQAGMHSHLYHGHSHH-----PSHPSHPNHPNHHGHPHHHGPPVMGHLSMAMSMGLAGMPN---- 322
            ...|:.:....|.:.|     |...|.|:..:.:            ..:|.:..|..||.:    
  Fly   328 ASGGLLAFAQVGGNDHDTWRRPRSESSPDAESVY------------MTNMVIDSGYHGMHSRKSS 380

  Fly   323 --MTNKITKKIV---PIQE----------KNSSGSTSRSMAAISLGFIVMVTPWT-IQEIVTACT 371
              .||.|.|...   .|:|          ::|............||:...||..| :|..|:.||
  Fly   381 IKSTNTIKKSYTCFGSIKEWCIAWWHSGREDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSRCT 445

  Fly   372 GSKLPPFLDFLVTWTALSNSLWNPFMYWLLNSDFRRMSRQLMPNKCFPHEDTPEHKSGCCHINAN 436
            .      ::.:....::..|:          |..|..|                       |..:
  Fly   446 S------MNVMRDNYSMGGSV----------SGVRPPS-----------------------ILLS 471

  Fly   437 DFEITTLPIPPEPPSSR---------------PPGGAGGGGGGPSSGGPSSGGGVASSIG---GS 483
            |...|.||.||....|:               ...|.|.|....::....:|.|..:..|   ||
  Fly   472 DVSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNGS 536

  Fly   484 VLGICGRSRTNSLSRSASQYIRGTMGGGVHNHQATETFSTTRPDIEGLSEKYWGE-----ILERT 543
            .:|:                  ||.|...|..      |.|.|.|..::.:...:     ||.|.
  Fly   537 GIGL------------------GTTGNATHRD------SRTLPVINRINSRSVSQDSVYTILIRL 577

  Fly   544 VSSG-NLNA-------------------MQKHLPPHLPYAHHLVHQIHQPQQHHQQQTTSFSKAS 588
            .|.| :.||                   ||....|.:             :..|:...|:.:.|:
  Fly   578 PSDGASSNAANGGGGGPGAGAAASASLSMQGDCAPSI-------------KMIHEDGPTTTAAAA 629

  Fly   589 DLQLNLNLSQAATAAEL----GKFSNSEPKLCEHLFHDVNCAKSKAANGDGESSGKLACGRSIPD 649
            .|     .|.|||...|    .:||....:...|..||.....:|..   .:..||...|.:...
  Fly   630 PL-----ASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVI---PKQLGKAGGGAAGGG 686

  Fly   650 IXYAEDVILAKNQLLARQAKCSHHPLHQQAK 680
            : .|..::.|:|   |.:.|.......|::|
  Fly   687 VGGAHALMNARN---AAKKKKKSQEKRQESK 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 46/193 (24%)
TM helix 1 41..65 CDD:410626 8/25 (32%)
TM helix 2 75..101 CDD:410626 9/25 (36%)
TM helix 3 113..143 CDD:410626 8/29 (28%)
TM helix 4 156..175 CDD:410626 5/29 (17%)
TM helix 5 200..220 CDD:410626 7/21 (33%)
7tm_GPCRs <334..407 CDD:475119 14/83 (17%)
TM helix 6 340..366 CDD:410628 6/26 (23%)
TM helix 7 377..402 CDD:410628 1/24 (4%)
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 48/212 (23%)
TM helix 1 106..132 CDD:320428 7/29 (24%)
TM helix 2 139..165 CDD:320428 9/25 (36%)
TM helix 3 177..207 CDD:320428 8/29 (28%)
TM helix 4 219..242 CDD:320428 4/22 (18%)
TM helix 5 265..294 CDD:320428 8/29 (28%)
7tm_GPCRs <707..783 CDD:475119 2/8 (25%)
TM helix 6 716..738 CDD:410628
TM helix 7 751..776 CDD:410628
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.