DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13579 and si:dkey-148a17.5

DIOPT Version :10

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001315622.1 Gene:si:dkey-148a17.5 / 100535037 ZFINID:ZDB-GENE-160728-121 Length:339 Species:Danio rerio


Alignment Length:201 Identity:48/201 - (23%)
Similarity:87/201 - (43%) Gaps:19/201 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IEAVLILVLTLGVIGANCLVIFVINNRRYAAYIHQQPRYLLTSLALNDLTIGLLIT-PFGLMPAL 102
            |.||..||.|.|    |.||::.|     ..::.|:...:|..|.|:...:.:||| |..:. :|
Zfish    28 ILAVCFLVGTPG----NLLVVWTI-----LKHVKQRSHTVLLILHLSIADLLVLITLPLWIY-SL 82

  Fly   103 FHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSKKGCVAILSLTWII 167
            ...|.:|:..|:....:..:....|..|:..|:|:|::...:|.:.....::.....:|.:|||:
Zfish    83 ARSWVFGKAACKAMVYIIYSCMYSSVFIITIMSVERFLAIRYPFKMLSWKNETAMFRLLLVTWIL 147

  Fly   168 SLTVFGFLVLPKGYYFNNTGLMAC-EPFYSKPSYRILSTC-----ALYFP-TTMVLMYC-YGSSF 224
            ||.:...::|.:.....:.|...| ...|:..|:.:...|     ....| .|:.:.|| ..:..
Zfish   148 SLLLGSPVILTQSLDDEDDGTGHCLHRVYNSLSFEVFCMCLETLLGFVIPFFTLAICYCQVAAQL 212

  Fly   225 HMSRFR 230
            ...|||
Zfish   213 RKVRFR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 44/187 (24%)
TM helix 1 41..65 CDD:410626 10/23 (43%)
TM helix 2 75..101 CDD:410626 7/26 (27%)
TM helix 3 113..143 CDD:410626 6/29 (21%)
TM helix 4 156..175 CDD:410626 6/18 (33%)
TM helix 5 200..220 CDD:410626 5/26 (19%)
7tm_GPCRs <334..407 CDD:475119
TM helix 6 340..366 CDD:410628
TM helix 7 377..402 CDD:410628
si:dkey-148a17.5NP_001315622.1 7tm_GPCRs 25..291 CDD:475119 48/201 (24%)
TM helix 1 25..49 CDD:320106 11/29 (38%)
TM helix 2 58..79 CDD:320106 7/20 (35%)
TM helix 3 94..116 CDD:320106 3/21 (14%)
TM helix 4 139..155 CDD:320106 6/15 (40%)
TM helix 5 183..206 CDD:320106 3/22 (14%)
TM helix 6 224..246 CDD:320106
TM helix 7 265..290 CDD:320106
Blue background indicates that the domain is not in the aligned region.

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