DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13579 and kiss1r

DIOPT Version :10

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001163985.1 Gene:kiss1r / 100316929 XenbaseID:XB-GENE-990075 Length:366 Species:Xenopus tropicalis


Alignment Length:423 Identity:77/423 - (18%)
Similarity:147/423 - (34%) Gaps:127/423 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ETIEAVLI-----LVLTLGVIGANCLVIFVINNRRYAAYIHQQPR----YLLTSLALNDLTIGLL 92
            :.::|.|:     :::.:|:.| |.|||:||:.       |:|.|    :.:.:||..|:...:.
 Frog    38 QLVDAWLVPLFFAMLMLVGLTG-NSLVIYVISK-------HKQMRTVTNFYIANLAATDIIFLVS 94

  Fly    93 ITPFGLMPALFHC--WPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSKK 155
            ..||  ..||:..  |.:||..|:....::....|.:.|.|..|:|||:...::|.:..:..:.:
 Frog    95 CVPF--TAALYPLPGWIFGEFMCKFVNYIQQVSVQATCVTLTAMSVDRWYVTVYPLQSLRQRTPR 157

  Fly   156 GCVAILSLTW----IISLTVFGFLVLPKGYYFNNTGLMACEPFYS---KPSYRILSTCALYFPTT 213
            ...|:....|    |:|:.|..:..|.:||:| ...:...|.|.|   :.::.:.:...:|....
 Frog   158 VAAAVSVGIWIGSFIVSIPVPIYNQLIEGYWF-GPQIYCSESFPSVSHEKAFILYNFLVVYLLPL 221

  Fly   214 MVLMYCYGSSFHMSRFRLNDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQQHHQQAGMHSHLYHG 278
            :.:..||.                                                         
 Frog   222 ITICICYS--------------------------------------------------------- 229

  Fly   279 HSHHPSHPSHPNHPNHHGHPHHHGPPVMGHLSMAMSMGLAGMPNMTNKITKKIVPIQEKNSSGST 343
                                           :|...||...:..:.|....:::..:.:......
 Frog   230 -------------------------------AMVYQMGRPSVEPVDNSYQVQLLAERSELMRTKI 263

  Fly   344 SRSMAAISLGFIVMVTPWTIQEIVTACTGSKLPPFLDFLV-TWT---ALSNSLWNPFMYWLLNSD 404
            ||.:|.|.|.|.:...|..:..:..|.:.|....:..:.| .|.   :.:||..||.:|..:.::
 Frog   264 SRMVAVIVLLFTICWGPIQLYILFQAFSPSFKRDYYTYKVKIWANCMSYTNSSINPIVYAFMGAN 328

  Fly   405 FRRMSRQLMPNKCFPHEDTPE-HKSGCCHINAN 436
            ||:..     ||.||...... ..:|..:.|||
 Frog   329 FRKAF-----NKVFPFLFKQRVGSTGVANANAN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_classA_rhodopsin-like 41..>220 CDD:410626 45/196 (23%)
TM helix 1 41..65 CDD:410626 10/28 (36%)
TM helix 2 75..101 CDD:410626 6/29 (21%)
TM helix 3 113..143 CDD:410626 8/29 (28%)
TM helix 4 156..175 CDD:410626 5/22 (23%)
TM helix 5 200..220 CDD:410626 1/19 (5%)
7tm_GPCRs <334..407 CDD:475119 17/76 (22%)
TM helix 6 340..366 CDD:410628 7/25 (28%)
TM helix 7 377..402 CDD:410628 7/28 (25%)
kiss1rNP_001163985.1 7tmA_KiSS1R 43..333 CDD:320223 68/388 (18%)
TM helix 1 44..70 CDD:320223 9/33 (27%)
TM helix 2 77..103 CDD:320223 6/27 (22%)
TM helix 3 115..145 CDD:320223 8/29 (28%)
TM helix 4 157..177 CDD:320223 4/19 (21%)
TM helix 5 205..234 CDD:320223 4/116 (3%)
TM helix 6 258..288 CDD:320223 7/29 (24%)
TM helix 7 301..326 CDD:320223 7/24 (29%)

Return to query results.
Submit another query.