DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13579 and cbwd1.1

DIOPT Version :9

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_031750968.1 Gene:cbwd1.1 / 100145154 XenbaseID:XB-GENE-5878454 Length:426 Species:Xenopus tropicalis


Alignment Length:432 Identity:86/432 - (19%)
Similarity:156/432 - (36%) Gaps:117/432 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 YSGHNFIAHIGIAETIEAVLILVLTLGVIGANCLVIFVINNRRYAAYI---HQQPRYLLTSLALN 85
            :.|.:....|||...:..::||        .|..|:.||     |:.:   ....||:|.||...
 Frog    43 FPGRDHALKIGIITALGCLIIL--------GNSFVLLVI-----ASSVSGWSSNSRYILISLTGT 94

  Fly    86 DLTIGLLITPFGLMPALFHCWPYGEI----------------FCQIQALLRGALSQQSAVILVCM 134
            |:|:.|::.|..|         ||.:                :|.|.|.|..::...|...|..:
 Frog    95 DVTLALVVVPLNL---------YGSLALEPGEEDDEESPISRYCHIVAFLNSSVFASSIYSLTTI 150

  Fly   135 AVDRYMCALHPRRYYQHSSKKGCVAILSLTWIISLTVFGFLVLPKG----YYFNNTGLMACEPFY 195
            :::||:....|..|.:..|::....:::..|::.......:.:|.|    .||:...|: |.|.|
 Frog   151 SLERYVAVFFPLHYSRVMSRRRVKMLIAAAWLLPPIFLCPISIPGGRFIRVYFSRASLI-CNPDY 214

  Fly   196 -SKPSYRILSTCALYFPTTMVLMYCYGSSFHMSRFRLNDPTMPLTAAAHHPHPHPHPTAAQQLQM 259
             |..:|.:|.|..::||.:.::.:.....:.::|.:....::...|.:   .....||...:|. 
 Frog   215 ASNVAYSLLLTAVIFFPCSAIVTFANLRLWRVARRQSRRMSVGWAAKS---KGLCLPTVCGRLA- 275

  Fly   260 HQHQQHHQQAGMHSHLYHGHSHHPSHPSHPNHPNHHGHPHHHGPPVMGHLSMAMSMGLAGMPNMT 324
                                   |:..|.||.                  .::..||..|:    
 Frog   276 -----------------------PNRESGPNK------------------GLSRDMGDKGL---- 295

  Fly   325 NKITKKIVPIQEKNSSGSTSRSMAAISLGFIVMVTPWTIQEIVTACTGSKLPPFLDFLVTWTALS 389
                         ....:.||.:..:.:.|.....|..|..:..|.|..::|.:::|:..|....
 Frog   296 -------------RKGDAASRVLVPVVIVFYTCWAPCMITILYNAITQDRVPEWVEFVALWLPCG 347

  Fly   390 NSLWNPFMYWLLNSDFRRMSRQLMPNKCFP-------HEDTP 424
            |...|.|:|:.:|..||...||| ..|.:|       |:.||
 Frog   348 NGFLNCFVYFWINKSFRHKFRQL-GRKLWPWGCARKNHQITP 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_4 51..>148 CDD:304433 26/115 (23%)
cbwd1.1XP_031750968.1 7tm_classA_rhodopsin-like 51..360 CDD:410626 74/393 (19%)
TM helix 1 51..75 CDD:410626 9/36 (25%)
TM helix 2 84..107 CDD:410626 9/22 (41%)
TM helix 3 130..152 CDD:410626 5/21 (24%)
TM helix 4 175..191 CDD:410626 1/15 (7%)
TM helix 5 218..241 CDD:410626 5/22 (23%)
TM helix 6 302..324 CDD:410626 5/21 (24%)
TM helix 7 335..360 CDD:410626 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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