DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13579 and htr1fb

DIOPT Version :9

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_005159986.1 Gene:htr1fb / 100004819 ZFINID:ZDB-GENE-090312-140 Length:372 Species:Danio rerio


Alignment Length:406 Identity:96/406 - (23%)
Similarity:156/406 - (38%) Gaps:92/406 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LILVLTLGVIGA-----NCLVIFVINNRRYAAYIHQQPRYLLTSLALNDLTIGLLITPFGLMPAL 102
            ::|.|||..:..     |.|||..|...|   .:||...||:.|||:.||.:.:|:.|..::...
Zfish    24 ILLSLTLSFLAVATTAINSLVITAILITR---KLHQPANYLICSLAVTDLLVAVLVMPVSIVYIA 85

  Fly   103 FHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQ-HSSKKGCVAILSLTW- 165
            ...|..|.|.|.:...:.......|.:.|..:|:|||........|.| .:.|:..|.|||| | 
Zfish    86 EETWVLGPIVCHLWLGVDVTCCTCSILHLAAIALDRYRAITDAVAYSQKRTYKRVIVTILSL-WT 149

  Fly   166 ---IISLTVFGFLVLPK-GYYFNNTGLMACEPFYSKPSYRILSTC-ALYFPTTMVLMYCYGSSFH 225
               ::||....:...|| .:.......|.|...:...::.:.||. |.|.|..::|:..|...  
Zfish   150 LSILVSLPPLVWRKFPKVEFKDGKREPMDCLIEHDHVAFTVYSTFGAFYIPLALILVLYYKIY-- 212

  Fly   226 MSRFRLNDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQQHHQQAGMHSHLYHGHSHHPSHPSHP- 289
                                      .||:.|:..:......:..:.|.:..|.|........| 
Zfish   213 --------------------------KAAEMLRNRRGSSRLVKQTVSSVMLPGMSSDKDIALSPD 251

  Fly   290 ---------NHPNHHGHPHHHGPPVMGHLSMAMSMGLAGMPNMTNKITKKIVPIQEKNSSGSTSR 345
                     :.|:..|.          .:.:..|.|     |:          |:.:.:.|:..|
Zfish   252 SFCPIEKSFSDPSTDGE----------RVRITSSSG-----NL----------IRVRRNPGARER 291

  Fly   346 SMAAISLG-----FIVMVTPWTIQEIVT----ACTGSKLPPFLDFLVTWTALSNSLWNPFMYWLL 401
             .||::||     |:|...|:.::|::.    .||.|.:  ..||| ||....|||.||.:|.:.
Zfish   292 -RAALTLGLILGAFVVCWLPFFLKEVIVNICPTCTTSAV--LADFL-TWLGYLNSLINPLIYTIF 352

  Fly   402 NSDFRRMSRQLMPNKC 417
            |.||::..::|:|..|
Zfish   353 NEDFKKAFKKLLPLCC 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_4 51..>148 CDD:304433 27/101 (27%)
htr1fbXP_005159986.1 7tm_1 41..349 CDD:278431 85/368 (23%)
7tm_4 41..>165 CDD:304433 38/127 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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