DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13579 and kiss1rb

DIOPT Version :9

Sequence 1:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001104001.1 Gene:kiss1rb / 100002715 ZFINID:ZDB-GENE-060526-54 Length:364 Species:Danio rerio


Alignment Length:414 Identity:70/414 - (16%)
Similarity:144/414 - (34%) Gaps:133/414 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FIAHIGIAET--IEAVLILVLTLGVIGANCLVIF-VINNRRYAAYIHQQPRYLLTSLALNDLTIG 90
            |.:.:.:.:|  :.....|::.:|::| |.:||: ||.|::.....:    ..:.:||..|:...
Zfish    33 FQSPVPLTDTWLVPLFFTLIMFVGLVG-NLIVIYVVIKNQQMKTVTN----LYIVNLATTDILFL 92

  Fly    91 LLITPFGLMPALFHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSKK 155
            :...||.....:...|.:|:..|::...|:...:|.:.:.|..|:|||:...::|.:...|.:.:
Zfish    93 VCCVPFTATVYVLPSWIFGDFMCRLVNYLQQVTAQATCITLSAMSVDRFYVTVYPLQSLHHRTPQ 157

  Fly   156 GCVAILSLTWIISLTVFGFLVLP--------KGYYFNNTGLMACEPFYS---KPSYRILSTCALY 209
            ..:::.:..||.|    ..|.:|        ..|:| .......|.|.|   |..|.:.|..|:|
Zfish   158 MALSVCTTIWICS----SLLSVPIALYQHTESSYWF-GPQTYCTETFPSVIHKRVYLLYSFLAVY 217

  Fly   210 FPTTMVLMYCYGSSFHMSRFRLNDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQQHHQQAGMHSH 274
            ....:.:..||  :|.:.|.                                     .||.:.  
Zfish   218 LLPLITICMCY--TFMLKRM-------------------------------------AQATVQ-- 241

  Fly   275 LYHGHSHHPSHPSHPNHPNHHGHPHHHGPPVMGHLSMAMSMGLAGMPNMTNKITKKIV------- 332
                                         ||.|...:::.........:.:::::.:|       
Zfish   242 -----------------------------PVQGCNQISLQTSSERAEAVRSRVSRMVVVMVLLFL 277

  Fly   333 ----PIQEKNSSGSTSRSMAAISLGFIVMVTPWTIQEIVTACTGSKLPPFLDFLVTWT---ALSN 390
                |||                  .::::..:..:::..:.|..||.       .|.   :.||
Zfish   278 LCWGPIQ------------------ILILLQAFCAEDVSRSYTLYKLK-------IWAHGMSYSN 317

  Fly   391 SLWNPFMYWLLNSDFRRMSRQLMP 414
            |..||.:|..:.::||:..|.:.|
Zfish   318 SSINPVIYAFMGANFRKAFRSVCP 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13579NP_001261169.1 7tm_4 51..>148 CDD:304433 23/97 (24%)
kiss1rbNP_001104001.1 7tm_1 59..325 CDD:278431 61/370 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24230
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.