Protein Alignment CG3494 and Sur-8

DIOPT Version :10

• Sequence 1: NP_611915.1
• Gene: CG3494 / 37903
• FlyBaseID: FBgn0035008
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_001262665.1
• Gene: Sur-8 / 42093
• FlyBaseID: FBgn0038504
• Length: 694
• Species: Drosophila melanogaster
• Alignment Length: 220
• Identity: 58/220 - (26%)
• Similarity: 99/220 - (45%)
• Gaps: 17/220 - (7%)

  Fly     6 DGLNSPRLQGGKEAEADG-----------SQWPFPDKYHMRNTRILQVSKAQISEVPMEVFEAAQ 59
            :|....:|..|..|...|           :.:|........|...:.:...:|.::|..:|..|:
  Fly   375 EGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAK 439

  Fly    60 QELVNIVSLDGNRLLEMPKDLPLLSEHLTQLVLNKNQISFVPTNISQYSKLTNLSLSNNLLCDLP 124
            .  :..:::..|.|..:|.|:... .::.:|.|..|.:..:|.:|.....|..|.||||:|..:|
  Fly   440 G--LTKLNMKENMLTALPLDIGTW-VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIP 501

  Fly   125 MELGGLRLLRNLDISHNRFRQLPRCIYELERLETLSAHDNQIRAIDASESGLGGMRELKRLNLGN 189
            ..:|.||.||.||:..||...||..|..|..|:.|....|||..:..|   :|.:..|..|::..
  Fly   502 NTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRS---IGHLGNLTHLSVSE 563

  Fly   190 NDIQIVPPILGKMQNLVELELWGNP 214
            |::|.:|..:|.:::|..|.:..||
  Fly   564 NNLQFLPEEIGSLESLENLYINQNP 588

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3494	NP_611915.1	LRR	<32..>215	CDD:443914	52/183 (28%)
		leucine-rich repeat	38..62	CDD:275380	4/23 (17%)
		leucine-rich repeat	63..86	CDD:275380	4/22 (18%)
		leucine-rich repeat	87..109	CDD:275380	5/21 (24%)
		leucine-rich repeat	110..133	CDD:275380	11/22 (50%)
		leucine-rich repeat	134..155	CDD:275380	9/20 (45%)
		leucine-rich repeat	156..181	CDD:275380	7/24 (29%)
		leucine-rich repeat	182..204	CDD:275380	6/21 (29%)
Sur-8	NP_001262665.1	leucine-rich repeat	163..184	CDD:275380
		LRR	185..535	CDD:443914	42/162 (26%)
		leucine-rich repeat	185..207	CDD:275380
		leucine-rich repeat	208..230	CDD:275380
		leucine-rich repeat	231..253	CDD:275380
		leucine-rich repeat	254..276	CDD:275380
		leucine-rich repeat	277..299	CDD:275380
		leucine-rich repeat	300..322	CDD:275380
		leucine-rich repeat	323..345	CDD:275380
		leucine-rich repeat	346..368	CDD:275380
		leucine-rich repeat	369..392	CDD:275380	4/16 (25%)
		leucine-rich repeat	417..440	CDD:275380	4/22 (18%)
		leucine-rich repeat	441..486	CDD:275380	9/45 (20%)
		PPP1R42	472..617	CDD:455733	41/120 (34%)
		leucine-rich repeat	487..507	CDD:275380	9/19 (47%)
		leucine-rich repeat	510..532	CDD:275380	10/21 (48%)
		leucine-rich repeat	556..578	CDD:275380	6/21 (29%)
		leucine-rich repeat	603..626	CDD:275380