Protein Alignment CG3494 and f-cup

DIOPT Version :10

• Sequence 1: NP_611915.1
• Gene: CG3494 / 37903
• FlyBaseID: FBgn0035008
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_001262544.1
• Gene: f-cup / 41677
• FlyBaseID: FBgn0028487
• Length: 802
• Species: Drosophila melanogaster
• Alignment Length: 208
• Identity: 104/208 - (50%)
• Similarity: 145/208 - (69%)
• Gaps: 2/208 - (0%)

  Fly    32 YHMRNTRILQVSKAQISEVPMEVFEAAQQELVNIVSLDGNRLLEMPKDLPLLSEHLTQLVLNKNQ 96
            |.:|:||.|.|:..:::.||.:||:.|:.|.|::|....|:|..:|..|..:.:.:|:|||:.|.
  Fly   596 YKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNV 660

  Fly    97 ISFVPTNISQYSKLTNLSLSNNLLCDLPMELGGLRLLRNLDISHNRFRQLPRCIYELERLETLSA 161
            |.:||..|||:::::.|:||||||.|||.|.|.|..||.|:|::|||..:|.|:|||:.||.|.|
  Fly   661 IGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIA 725

  Fly   162 HDNQIRAIDASESGLGGMRELKRLNLGNNDIQIVPPILGKMQNLVELELWGNPFRQPRHQILSMG 226
            .:|.|:.::.  |||..||.|..|:|.||||:.||||||.:.|:..|||.||||||||||||..|
  Fly   726 SENHIKMLNV--SGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKG 788

  Fly   227 TPALLSYLRTRIP 239
            |.|::||||.|||
  Fly   789 TDAIMSYLRDRIP 801

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3494	NP_611915.1	LRR	<32..>215	CDD:443914	84/182 (46%)
		leucine-rich repeat	38..62	CDD:275380	8/23 (35%)
		leucine-rich repeat	63..86	CDD:275380	6/22 (27%)
		leucine-rich repeat	87..109	CDD:275380	11/21 (52%)
		leucine-rich repeat	110..133	CDD:275380	13/22 (59%)
		leucine-rich repeat	134..155	CDD:275380	11/20 (55%)
		leucine-rich repeat	156..181	CDD:275380	10/24 (42%)
		leucine-rich repeat	182..204	CDD:275380	13/21 (62%)
f-cup	NP_001262544.1	LRR	98..428	CDD:443914
		leucine-rich repeat	111..140	CDD:275380
		leucine-rich repeat	158..180	CDD:275380
		leucine-rich repeat	181..203	CDD:275380
		leucine-rich repeat	204..226	CDD:275380
		leucine-rich repeat	227..249	CDD:275380
		leucine-rich repeat	250..272	CDD:275380
		leucine-rich repeat	273..295	CDD:275380
		leucine-rich repeat	296..318	CDD:275380
		leucine-rich repeat	319..340	CDD:275380
		leucine-rich repeat	341..364	CDD:275380
		leucine-rich repeat	389..410	CDD:275380
		leucine-rich repeat	411..430	CDD:275380
		leucine-rich repeat	627..650	CDD:275380	6/22 (27%)
		LRR	<629..>778	CDD:443914	72/150 (48%)
		leucine-rich repeat	651..669	CDD:275380	8/17 (47%)
		leucine-rich repeat	697..719	CDD:275380	12/21 (57%)
		leucine-rich repeat	720..743	CDD:275380	10/24 (42%)
		leucine-rich repeat	744..766	CDD:275380	13/21 (62%)