DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3494 and LRRD1

DIOPT Version :9

Sequence 1:NP_611915.1 Gene:CG3494 / 37903 FlyBaseID:FBgn0035008 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001155000.1 Gene:LRRD1 / 401387 HGNCID:34300 Length:860 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3494NP_611915.1 LRR <34..>231 CDD:227223
leucine-rich repeat 38..62 CDD:275380
leucine-rich repeat 63..86 CDD:275380
LRR_4 85..124 CDD:289563
leucine-rich repeat 87..109 CDD:275380
leucine-rich repeat 110..133 CDD:275380
leucine-rich repeat 134..155 CDD:275380
leucine-rich repeat 156..181 CDD:275380
leucine-rich repeat 182..204 CDD:275380
LRRD1NP_001155000.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103
LRR 1 139..163
leucine-rich repeat 145..165 CDD:275380
LRR 2 164..186
LRR_8 166..223 CDD:290566
leucine-rich repeat 166..189 CDD:275380
LRR 3 187..210
leucine-rich repeat 190..212 CDD:275380
LRR 4 211..233
leucine-rich repeat 213..235 CDD:275380
LRR 5 235..256
leucine-rich repeat 236..258 CDD:275380
LRR 6 257..279
LRR_8 258..315 CDD:290566
leucine-rich repeat 259..281 CDD:275380
LRR_RI 262..501 CDD:238064
LRR 7 281..302
leucine-rich repeat 282..304 CDD:275380
LRR 8 303..325
leucine-rich repeat 305..327 CDD:275380
LRR_8 326..384 CDD:290566
LRR 9 326..348
leucine-rich repeat 328..350 CDD:275380
LRR 10 350..371
LRR 11 372..394
LRR 12 396..417
leucine-rich repeat 397..419 CDD:275380
LRR 13 419..440
leucine-rich repeat 420..465 CDD:275380
LRR 14 441..463
LRR 15 465..486
LRR 16 487..510
LRR_8 488..545 CDD:290566
leucine-rich repeat 489..511 CDD:275380
leucine-rich repeat 512..534 CDD:275380
LRR 17 512..532
LRR 18 533..555
leucine-rich repeat 535..557 CDD:275380
LRR_8 557..614 CDD:290566
LRR 19 557..578
leucine-rich repeat 558..580 CDD:275380
LRR 20 579..601
LRR_RI <581..>715 CDD:238064
leucine-rich repeat 581..603 CDD:275380
LRR 21 603..624
leucine-rich repeat 604..626 CDD:275380
leucine-rich repeat 627..652 CDD:275380
LRR 22 627..650
LRR_8 651..709 CDD:290566
LRR 23 651..673
leucine-rich repeat 653..675 CDD:275380
LRR 24 675..696
leucine-rich repeat 676..698 CDD:275380
LRR 25 697..719
LRR 26 721..742
leucine-rich repeat 722..742 CDD:275380
LRR 27 856..860
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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