DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3492 and ppiB

DIOPT Version :9

Sequence 1:NP_611914.1 Gene:CG3492 / 37902 FlyBaseID:FBgn0035007 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_415058.1 Gene:ppiB / 949038 ECOCYCID:EG10758 Length:164 Species:Escherichia coli


Alignment Length:156 Identity:32/156 - (20%)
Similarity:65/156 - (41%) Gaps:35/156 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 GRLIIQLFTEACPQVVLEFMRICTQNNSSAIVFNRALAPIWMEGRLAMDP---QRSTELTNIEHD 322
            |.::|:.|.:..|:.|..|:..|.:...:..:|:|.:....::|. ..:|   |::|:       
E. coli     9 GDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGG-GFEPGMKQKATK------- 65

  Fly   323 FEVLNHGVDAGILSFPSRYVRGN---ARTAV--------------NFTISFKPLSILNGRRIAFG 370
             |.:.:..:.|:     :..||.   |||..              |..::|...|:.......|.
E. coli    66 -EPIKNEANNGL-----KNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFA 124

  Fly   371 KVRKGMQLLERIQ-VAVGHLPMSHNL 395
            :|..||.::::|: ||.|...|..::
E. coli   125 EVVDGMDVVDKIKGVATGRSGMHQDV 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3492NP_611914.1 cyclophilin 249..388 CDD:294131 30/147 (20%)
ppiBNP_415058.1 PRK10791 1..164 CDD:182734 32/156 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.