DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3492 and ppid

DIOPT Version :9

Sequence 1:NP_611914.1 Gene:CG3492 / 37902 FlyBaseID:FBgn0035007 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001002065.1 Gene:ppid / 415155 ZFINID:ZDB-GENE-040625-34 Length:371 Species:Danio rerio


Alignment Length:186 Identity:44/186 - (23%)
Similarity:77/186 - (41%) Gaps:48/186 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 PQIYLDIEVREARIQGRLIIQLFTEACPQVVLEFMRICTQNNS-----------SAIVFNRALAP 299
            |:::.|:|:...|: ||::.:||.:..|:....|..:||....           ....|:|.:..
Zfish    16 PRVFFDVEIGAERV-GRVVFELFADVVPKTAENFRALCTGEKGVGKSTGKPLHFKGCPFHRIIKS 79

  Fly   300 IWMEGRLAMDPQRST------------ELTNIEHDFEVLNHGVDAGILSFPSRYVRGNARTAVN- 351
            ..::|. ....|..|            |..:.:||.|        |:||.      .||....| 
Zfish    80 FMIQGG-DFSNQNGTGGESIYGDKFEDENFHYKHDRE--------GLLSM------ANAGPNTNG 129

  Fly   352 --FTISFKPLSILNGRRIAFGKVRKGM---QLLERIQVAVGHLPMSHNLISLTDCG 402
              |.|:..|...|:|:.:.||:|.|||   ::||.::....: |:...:|:  :||
Zfish   130 SQFFITTVPTPHLDGKHVVFGQVLKGMGVVKMLEAMETKEDN-PVKPCVIA--ECG 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3492NP_611914.1 cyclophilin 249..388 CDD:294131 39/167 (23%)
ppidNP_001002065.1 cyclophilin_ABH_like 16..182 CDD:238907 42/184 (23%)
TPR_11 223..304 CDD:290150
TPR repeat 223..268 CDD:276809
TPR_12 271..340 CDD:290160
TPR repeat 273..303 CDD:276809
TPR repeat 308..336 CDD:276809
TPR_1 309..341 CDD:278916
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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