DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3492 and Ppil2

DIOPT Version :9

Sequence 1:NP_611914.1 Gene:CG3492 / 37902 FlyBaseID:FBgn0035007 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001017383.1 Gene:Ppil2 / 360746 RGDID:1309484 Length:521 Species:Rattus norvegicus


Alignment Length:366 Identity:67/366 - (18%)
Similarity:127/366 - (34%) Gaps:90/366 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 THNPNLVGL--DGQVEDSRPKHTFNVKRQELENNYRHHQRLIPVPTSRRTMPKIRSHIVMNEQRE 105
            |.|.::|.:  .|.|.........|:|.:.|.:      .|...|.||:.:      |.:.:...
  Rat   111 TDNTHIVAIRTTGNVYTYEAVEQLNIKAKNLRD------LLTDEPFSRQDI------ITLQDPTN 163

  Fly   106 LYRQHRDRMSNIKGKVNTYLP-------PPKVQIEGNGMELSYMEMLTALYK--KSNNTLRTFTK 161
            |.:.:.....::|..:....|       .|...::....|.  .|.|..|||  |.:..|....|
  Rat   164 LDKFNVSSFFHVKNNMRMIDPDEEKAKQDPSYYLKNTNAET--RETLQELYKEFKGDEILAATMK 226

  Fly   162 SPERLAAGRWRNANLAREKERRQLEKNKEFHKGGELFDPEAGKSKRYKPKSSGSFSCEIPMHVLH 226
            .||:              |:..||  |...:..|               |.|.||:....:....
  Rat   227 PPEK--------------KKVDQL--NAAHYSTG---------------KVSASFTSTAMVPETT 260

  Fly   227 RYENLMDQCDVGVLCKLLRPQIYLDIEVREARIQGRLIIQLFTEACPQVVLEFMRICTQNNSSAI 291
            ....::|: || :..:.::.:.|:.:...    :|.|.::|..:..|:....|:::|.:......
  Rat   261 HEAAVIDE-DV-LRYQFVKKKGYVRLHTN----KGDLNLELHCDLTPKTCENFIKLCKKQYYDGT 319

  Fly   292 VFNRALAPIWMEGRLAMDPQ--------------RSTELTNIEHDFEVLNHGVDAGILSFPSRYV 342
            :|:|::....::|.   ||.              :.....|:.|        ...|:||..:   
  Rat   320 IFHRSIRNFVIQGG---DPTGTGTGGESYWGKPFKDEFRPNLSH--------TGRGVLSMAN--- 370

  Fly   343 RGNARTAVNFTISFKPLSILNGRRIAFGKVRKGMQLLERIQ 383
            .|.......|.|:|:..:.|:.:...||:|..|...|..::
  Rat   371 SGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAME 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3492NP_611914.1 cyclophilin 249..388 CDD:294131 27/149 (18%)
Ppil2NP_001017383.1 Ubox 42..96 CDD:128780
cyclophilin_RING 281..440 CDD:238904 27/149 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.