DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3492 and cyn-13

DIOPT Version :9

Sequence 1:NP_611914.1 Gene:CG3492 / 37902 FlyBaseID:FBgn0035007 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001255925.1 Gene:cyn-13 / 178487 WormBaseID:WBGene00000889 Length:331 Species:Caenorhabditis elegans


Alignment Length:234 Identity:49/234 - (20%)
Similarity:91/234 - (38%) Gaps:53/234 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 GRWRNANLAR-----EKERRQL----EKNKEFHKGGELFDPEAGKSKRYKPKSSGSFSCEIPMHV 224
            |:....|.||     |:.::.:    |..|::.:|||....|.|.:::....||.:.:       
 Worm    79 GKTIRVNFARPPKATERSQKPVWADDEWLKKYGRGGEAAAEEDGDAEKAATSSSSAST------- 136

  Fly   225 LHRYENLMDQCDVGVLCKLLRPQIYLDIEVREARIQGRLIIQLFTEACPQVVLEFMRICTQNNS- 288
                             ||  |::||.::: ..|..||::|:|.|:..|:....|..:||.... 
 Worm   137 -----------------KL--PRVYLGVKI-GIRYIGRIVIELRTDVTPKTAENFRCLCTGERGF 181

  Fly   289 --SAIVFNRALAPIWMEGR--LAMDPQRSTELTNIEHDFE--VLNHGVDAGILSFPSRYVRGNAR 347
              ...:|:|.:....::|.  ...|......:...:.|.|  .|.|       :.|......|..
 Worm   182 GYEGSIFHRIIPKFMLQGGDFTKGDGTGGKSIYGTKFDDENFTLRH-------TMPGTVSMANCG 239

  Fly   348 TAVN---FTISFKPLSILNGRRIAFGKVRKGMQLLERIQ 383
            ...|   |.|..:....|:|:.:.||.|.:||.::.:::
 Worm   240 ANTNGSQFFICTEKTDWLDGKHVVFGHVVEGMNIVRQVE 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3492NP_611914.1 cyclophilin 249..388 CDD:294131 32/145 (22%)
cyn-13NP_001255925.1 RRM <10..>115 CDD:223796 8/35 (23%)
RRM_PPIE 13..85 CDD:240793 1/5 (20%)
cyclophilin_ABH_like 139..297 CDD:238907 33/148 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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