DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3492 and ranbp2

DIOPT Version :10

Sequence 1:NP_611914.1 Gene:CG3492 / 37902 FlyBaseID:FBgn0035007 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_073768430.1 Gene:ranbp2 / 100317326 ZFINID:ZDB-GENE-081104-93 Length:2746 Species:Danio rerio


Alignment Length:400 Identity:80/400 - (20%)
Similarity:148/400 - (37%) Gaps:108/400 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 THNPNLVGLDGQVEDSRPKHTFNVKRQELENNYRHHQRLIPVPTSRRTMPKIRSHIVMNEQRELY 107
            ||..:    |.:.:|....|:..:          |.:.::.:|.......:....|:..|:..||
Zfish  2413 THRDD----DDEGDDDEAPHSDEI----------HFEPIVSLPEVEVRSGEEDEEILFKERCRLY 2463

  Fly   108 RQHRDRMSNIK----GKVNTYLPPPKVQIE-----------------GNGMELSYMEMLTALYKK 151
            |..|| :...|    |::.....|.|....                 .:|:.|::|.      ..
Zfish  2464 RWDRD-LQQWKERGVGELKILFHPQKKSYRLLMRREQVLKVCANHTISSGITLTHMN------SS 2521

  Fly   152 SNNTLRTFTK------SPERLAAGRWRNANLAREKERRQLEKNKEFHKGGELFDPEAGKSKRYKP 210
            :|..:.|.|.      ..|:||. ::::|:||:...|              :|:           
Zfish  2522 ANALVWTATDYAEGDGKVEQLAV-KFKSADLAQSFRR--------------VFE----------- 2560

  Fly   211 KSSGSFSCEIPMHVLHRYENLMDQCDVGVLCKLLR---PQIYLDIEVREARIQGRLIIQLFTEAC 272
                  .|:       |..:..|...|.:...|.|   |:::.|:.| :....||::::||....
Zfish  2561 ------DCQ-------RCVSQADSAQVSLAETLSRESNPRVFFDVCV-DGEDAGRIVMELFAHIV 2611

  Fly   273 PQVVLEFMRICTQNNS---SAIVFNRALAPIWMEGRLAMDPQRSTELTNI------EHDFEVLNH 328
            |:....|..:||....   |..:|:|.:.....:|. .:..|..|...:|      :..|||.:.
Zfish  2612 PKTAENFRALCTGEKGFGYSGSIFHRIIPDFMCQGG-DITHQDGTGGRSIYGHAFEDESFEVRHT 2675

  Fly   329 GVDAGILSFPSRYVRGNARTAVNFTISFKPLSILNGRRIAFGKVRKGMQLLERI-QVAVGHLPMS 392
            |  .|:||..:   ||....:..|.::.:....|:.:.:|||.|..|||:|.|: ::.......:
Zfish  2676 G--PGLLSMAN---RGRDSNSSQFFLTLRKAEHLDYKHVAFGFVTDGMQVLRRLAEMGTKEGKPT 2735

  Fly   393 HNLISLTDCG 402
            |. |::..||
Zfish  2736 HT-ITIHHCG 2744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3492NP_611914.1 Pro_isomerase 256..403 CDD:459694 38/156 (24%)
ranbp2XP_073768430.1 None

Return to query results.
Submit another query.