DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and 4CL1

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_175579.1 Gene:4CL1 / 841593 AraportID:AT1G51680 Length:561 Species:Arabidopsis thaliana


Alignment Length:532 Identity:142/532 - (26%)
Similarity:238/532 - (44%) Gaps:44/532 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PTVY-DHNTSVGQIVFNSLRCWPTNVIQITDDDGTVLTNADMLAYATRIALFFKSEGLTQEDRVG 87
            |.:| .::.|:...:|.::..:.|....|....|.|.|.:|:...:.:||..|...|:.|.|.|.
plant    30 PDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVM 94

  Fly    88 -IIANSSTFVIPVATACFFQATPFHAVNYSREPAIVQGLYSVTKPKIMFIDGPDYDRIKEITKEW 151
             ::.|...||:....|.|..||. .|.|....||.:......:..|::..:....|:||.:..:.
plant    95 LLLPNCPEFVLSFLAASFRGATA-TAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDD 158

  Fly   152 SPKLITLTGK-----VEGVTSIEDLVKPHPAEKIYVPASLATGGDQIAVVLCSSGTAGLPKAVAL 211
            ...::.:...     .||.....:|.: ...|...|..|:....|.:..:..||||.||||.|.|
plant   159 GVVIVCIDDNESVPIPEGCLRFTELTQ-STTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVML 222

  Fly   212 SHRHIAST----------NSLCISTDVLYTSATIDWMTGFSITVMN--LTCGF---TRIISRRTF 261
            :|:.:.::          |....|.||:.....:     |.|..:|  :.||.   ..|:....|
plant   223 THKGLVTSVAQQVDGENPNLYFHSDDVILCVLPM-----FHIYALNSIMLCGLRVGAAILIMPKF 282

  Fly   262 SAETALYLVSKYKVTCLAMAPWQAYELFTSPLATSEQLESLKIAFVIGGWISLALLRRAQELLPK 326
            .....|.|:.:.|||...|.|.....:..|.......|.|:::.......:...|........|.
plant   283 EINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPN 347

  Fly   327 TYVMFSYGTTETG-VVTINIDHSLE--------CSVGRLAPGMRIKIQGED-GQQLGVNQTGEVL 381
            ..:...||.||.| |:.:::..:.|        |  |.:.....:||...| |..|..||.||:.
plant   348 AKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGAC--GTVVRNAEMKIVDPDTGDSLSRNQPGEIC 410

  Fly   382 IDIGLKWEGYLSNPEDTATTL-QDGWINLGDLGYFDEDNNLYLVDRKKDLLKYKSKHYWPNEIEQ 445
            |......:|||:||..||.|: :|||::.||:|..|:|:.|::|||.|:|:|||.....|.|:|.
plant   411 IRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEA 475

  Fly   446 IIAELPEVEHVCVVGVRDARYGDAAGALIIKKEGAEIADQKVIDHVAQRVVVDYKQLNAGVIFVD 510
            ::...|::..|.||.:::...|:...|.::|.:.:|:::..|...|:::||. ||::|. |.|.:
plant   476 LLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVF-YKRINK-VFFTE 538

  Fly   511 KFPKNANGKVMR 522
            ..||..:||::|
plant   539 SIPKAPSGKILR 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 142/532 (27%)
Firefly_Luc_like 49..521 CDD:213279 136/503 (27%)
4CL1NP_175579.1 PLN02246 16..560 CDD:215137 142/532 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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