DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and AT1G21530

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001077573.1 Gene:AT1G21530 / 838754 AraportID:AT1G21530 Length:549 Species:Arabidopsis thaliana


Alignment Length:588 Identity:128/588 - (21%)
Similarity:206/588 - (35%) Gaps:180/588 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KETQVWS--GPPRPTVYDHNTSVGQIVFNSLRCWPTNVIQITDDDGTVLTNADMLAYATRIALFF 75
            |:.||.|  ||..|:||:...:|..                   .|.:|.|.:....|..:::..
plant    65 KQGQVVSVVGPNVPSVYELQFAVPM-------------------SGAILNNINPRLDAHALSVLL 110

  Fly    76 KSEGLTQEDRVGIIANSSTFVIPVATACFFQATPFHAVNYSREPAIVQGLYSVTKPKIMFID--- 137
            :.    .|.|:..:.:.|..::..|.:.|.|    |                 .||.::.:|   
plant   111 RH----SESRLVFVDHRSISLVLEAVSLFTQ----H-----------------EKPHLVLLDDDQ 150

  Fly   138 ------GPDY-DRIKEITK-------------EWSPKLITLTGKVEGVTSIEDLVKPHPAEKIYV 182
                  ..|: |..:||.:             ||.|.::..|                       
plant   151 ENDSSSASDFLDTYEEIMERGNSRFKWIRPQTEWQPMVLNYT----------------------- 192

  Fly   183 PASLATGGDQIAVVLCSSGTAGLPKAVALSHRHIASTNSLCISTDVLYTSATIDW---------- 237
                             |||...||.|.||||.|.          :|..|:.:||          
plant   193 -----------------SGTTSSPKGVVLSHRAIF----------MLTVSSLLDWSVPNRPVYLW 230

  Fly   238 ------MTGFSITVMNLTCGFTRIISRRTFSAETALYLVSKYKVTCLAMAPWQAYELFTSPLATS 296
                  ..|:..|......|.|.|.:||. .|.|...|:.|:.||.:..||.....|...||:| 
plant   231 TLPMFHANGWGYTWGTAAVGATNICTRRV-DAPTIYNLIDKHNVTHMCAAPMVLNMLINYPLST- 293

  Fly   297 EQLESLKIAFVIGGWISLALLRRAQELLPKTYVMFSYGTTETGVVTINI------DHSLECSVGR 355
             .|::.......|......::.||:.|  ...|..|||.|||....::.      ||        
plant   294 -PLKNPVQVMTSGAPPPATIISRAESL--GFNVSHSYGLTETSGPVVSCAWKPKWDH-------- 347

  Fly   356 LAPGMRIKIQGEDG-QQLGVNQ------------------TGEVLIDIGLKWEGYLSNPEDTATT 401
            |.|..|.:::...| :.||..:                  .||::........||..:|:.||..
plant   348 LDPLERARLKSRQGVRTLGFTEVDVRDRKTGKSVKHDGVSVGEIVFRGSSVMLGYYKDPQGTAAC 412

  Fly   402 L-QDGWINLGDLGYFDEDNNLYLVDRKKDLLKYKSKHYWPNEIEQIIAELPEVEHVCVVGVRDAR 465
            : :|||...||:|...:|..|.:.||.||::....::....|||.::...|.|:...||...|..
plant   413 MREDGWFYSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAEIETVLYTNPVVKEAAVVAKPDKM 477

  Fly   466 YGDAAGALIIKK-----EGAEIADQKVIDHVAQRVVVDYKQLNAGVIFVDKFPKNANGKVMRSLA 525
            :|:...|.:..|     :|:....::.|....:..:..| .:...|||.::.||.:.||:.:.|.
plant   478 WGETPCAFVSLKCDNNGDGSVPVTEREIREFCKTKLPKY-MVPRKVIFQEELPKTSTGKIQKFLL 541

  Fly   526 REV 528
            |::
plant   542 RQM 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 123/578 (21%)
Firefly_Luc_like 49..521 CDD:213279 116/541 (21%)
AT1G21530NP_001077573.1 PRK08162 4..549 CDD:236169 128/588 (22%)
ttLC_FACS_AEE21_like 12..543 CDD:213326 127/585 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.