DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and 4CL2

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_188761.1 Gene:4CL2 / 821678 AraportID:AT3G21240 Length:556 Species:Arabidopsis thaliana


Alignment Length:573 Identity:144/573 - (25%)
Similarity:242/573 - (42%) Gaps:131/573 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PTVY-DHNTSVGQIVFNSLRCWPTNVIQITDDDGTVLTNADMLAYATRIALFFKSEGLTQEDRVG 87
            |.:| .::..:...:|.::..:......|....|.|.|.||:...:.::|....:.|:.|.|.|.
plant    28 PDIYIPNHLPLHDYIFENISEFAAKPCLINGPTGEVYTYADVHVTSRKLAAGLHNLGVKQHDVVM 92

  Fly    88 I-IANSSTFVIPVATACFFQA---------TPFHAVNYSREPA----IVQGLYSVTKPKIMFIDG 138
            | :.||...|:....|.|..|         ||......::..|    :.|..| |.|.|.:..||
plant    93 ILLPNSPEVVLTFLAASFIGAITTSANPFFTPAEISKQAKASAAKLIVTQSRY-VDKIKNLQNDG 156

  Fly   139 -----PDYD-------RIKEITKEWSPKLITLTGKVEGVTSIEDLVKPHPAEKIYVPASLATGGD 191
                 .|.|       |..|:|:...|:          |.||.:.:.|                :
plant   157 VLIVTTDSDAIPENCLRFSELTQSEEPR----------VDSIPEKISP----------------E 195

  Fly   192 QIAVVLCSSGTAGLPKAVALSHR--------------------------------HIASTNSLCI 224
            .:..:..||||.||||.|.|:|:                                ||.:.||:.:
plant   196 DVVALPFSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFNRDDVILCVLPMFHIYALNSIML 260

  Fly   225 STDVLYTSATIDWMTGFSITVMNLTCGFTRIISRRTFSAETALYLVSKYKVTCLAMAPWQAYELF 289
            .:  |...|||..|..|.||::                    |..:.:.|||...:.|.....:.
plant   261 CS--LRVGATILIMPKFEITLL--------------------LEQIQRCKVTVAMVVPPIVLAIA 303

  Fly   290 TSPLATSEQLESLKI----AFVIGGWISLALLRRAQELLPKTYVMFSYGTTETG-VVTINIDHSL 349
            .||......|.|:::    |..:|..:..|:..:    .|...:...||.||.| |:.:::..:.
plant   304 KSPETEKYDLSSVRMVKSGAAPLGKELEDAISAK----FPNAKLGQGYGMTEAGPVLAMSLGFAK 364

  Fly   350 E--------CSVGRLAPGMRIKIQGED-GQQLGVNQTGEVLIDIGLKWEGYLSNPEDTATTL-QD 404
            |        |  |.:.....:||...| |..|..|:.||:.|......:|||::|..||:|: :|
plant   365 EPFPVKSGAC--GTVVRNAEMKILDPDTGDSLPRNKPGEICIRGNQIMKGYLNDPLATASTIDKD 427

  Fly   405 GWINLGDLGYFDEDNNLYLVDRKKDLLKYKSKHYWPNEIEQIIAELPEVEHVCVVGVRDARYGDA 469
            ||::.||:|:.|:|:.|::|||.|:|:|||.....|.|:|.::...||:..|.||.:::...|:.
plant   428 GWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEV 492

  Fly   470 AGALIIKKEGAEIADQKVIDHVAQRVVVDYKQLNAGVIFVDKFPKNANGKVMR 522
            ..|.:::.:.:.|::.::...|:::||. ||::|. |.|.|..||..:||::|
plant   493 PVAFVVRSKDSNISEDEIKQFVSKQVVF-YKRINK-VFFTDSIPKAPSGKILR 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 144/573 (25%)
Firefly_Luc_like 49..521 CDD:213279 140/544 (26%)
4CL2NP_188761.1 PLN02246 14..553 CDD:215137 144/573 (25%)
4CL 32..546 CDD:213272 142/569 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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