DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and slc27a1a

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001013555.1 Gene:slc27a1a / 541410 ZFINID:ZDB-GENE-050320-112 Length:647 Species:Danio rerio


Alignment Length:506 Identity:110/506 - (21%)
Similarity:182/506 - (35%) Gaps:105/506 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PTNVIQITDDDGTVLTNADMLAYATRIALFFKSEGLTQEDRVGIIANSSTFVIPVATACFF---- 105
            |..|.:.|.:..| .:..|.::.|  :|.:..|:|.|..|.|.:...|.    |:..|.:.    
Zfish    93 PALVYEATGETWT-FSQLDQISNA--VAHWALSQGWTSGDVVALFMESR----PLQVALWLGLAK 150

  Fly   106 -------------QATPFHAVNYSREPAIVQGLYSVTKPKIMFIDGPDYDRIKEITKEWSPKLIT 157
                         :.:..|.|..|....||.|....             |.:.|::...|..::.
Zfish   151 VGVEAALINFNLRRDSLLHCVGVSASRGIVFGAELA-------------DAVSEVSHSLSQTMVR 202

  Fly   158 L-TGKVEGVTSIEDL---VKPHPAEKIYVPA-------SLATGGDQIAVVLCSSGTAGLPKAVAL 211
            . ||.::     .||   :|..|.:.|...|       :::.|.:.....:.:|||.|||||..:
Zfish   203 FSTGDLK-----PDLMAALKCQPLDPILASAPRHPPSCTVSKGFNDHLFYIYTSGTTGLPKAAIV 262

  Fly   212 SHR---HIASTNSLCI---STDVLYTSATIDWMTGFSITVMN----LTCGFTRIISRRTFSAETA 266
            .|.   .||:...|..   ..|::|....:....|   .:|.    |..|.| ::.:|.|||...
Zfish   263 VHSRYYRIAAFGYLSFRMRPDDIIYDCLPLYHSAG---NIMGVGQCLIHGLT-VVVKRKFSASRF 323

  Fly   267 LYLVSKYKVTCLAMAPWQAYELFTSPLATSEQLESLKIAFVIGGWISLALLRRAQELLPKTYVMF 331
            .....|:..|.:.........|...|:..||:...:::|  :|..:..::.....|......:..
Zfish   324 WEDCIKHNCTVVQYIGEICRYLLAQPVRPSERQHRVRLA--VGNGLRPSVWEAFVERFRVKQIGE 386

  Fly   332 SYGTTETGVVTINIDHSL-ECSV-GRLAPGM----RIKIQGE------DGQQLGVN-QTGEVLID 383
            .||.|.......|:|..: .|.. .|:.|.:    .:|:..|      |.|.|.|: :.||..:.
Zfish   387 FYGATGCNCSIANMDGKVGACGFNSRILPNVYPIRLVKVNEETMELVRDKQGLCVSCRPGEPGLL 451

  Fly   384 IG--------LKWEGYLSNPEDTATTL-------QDGWINLGDLGYFDEDNNLYLVDRKKDLLKY 433
            :|        .:::||.|. |.|...:       .|.....||:...||...:|..||..|..::
Zfish   452 VGRINQQDPLRRFDGYASQ-EATRKKIAYNVFRKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRW 515

  Fly   434 KSKHYWPNEIEQIIAELPEVEHVCVVGVRDARYGDAAGALIIKKEGAEIAD 484
            |.::....|:|..::.|.....|.|.||........||.       |.|||
Zfish   516 KGENVSTTEVEGTLSGLLRQTDVAVFGVNVPGVEGKAGM-------AAIAD 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 110/506 (22%)
Firefly_Luc_like 49..521 CDD:213279 108/502 (22%)
slc27a1aNP_001013555.1 PRK08279 75..647 CDD:236217 110/506 (22%)
AFD_class_I 101..612 CDD:302604 107/498 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583004
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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