DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and Acsf3

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_574249.5 Gene:Acsf3 / 498962 RGDID:1586037 Length:583 Species:Rattus norvegicus


Alignment Length:575 Identity:123/575 - (21%)
Similarity:206/575 - (35%) Gaps:140/575 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TDDDGTVLTNADMLAYATRIALFFK--------------------------SEGLTQEDRVGIIA 90
            ||....|...|  ||:..|:||..|                          ..|..||:||..:.
  Rat    40 TDGSAPVFIRA--LAFGDRVALIDKHGRHTYRELYDRSLCLAQEICSLRGCKVGDLQEERVSFLC 102

  Fly    91 NSSTFVIPVATACFFQ---ATPFHAVNYSREPAIVQGLYSVTKPKIMFIDGPDY-DRIKEITKEW 151
            ::....:....|.:..   |.|.    |.:.|......:.......:.:.|.:| :|:..:.:..
  Rat   103 SNDVSYVIAQWASWMSGGVAVPL----YRKHPEAQLEYFIQDSRSSVVVVGQEYLERLSPLAQRL 163

  Fly   152 SPKLITLTGKV-EGVTSIEDLVKPHPAEK-IYVPASLATGGDQIAVVLCSSGTAGLPKAVALSHR 214
            ...|:.||..| .|.           ||| |..|.......|:.|::..:|||.|.||....:||
  Rat   164 GVPLLPLTPAVYHGA-----------AEKPIEQPIQEREWRDRGAMIFYTSGTTGRPKGALSTHR 217

  Fly   215 HIASTNSLCI------STDVLYTSATIDWMTGFSITVMNLTC----GFTRIISRRTFSAETALYL 269
            ::|:..:..:      ..||:.....:..:.|   .|..|.|    |.|.::... |||:     
  Rat   218 NLAAVVTGLVHSWAWTKNDVILHVLPLHHVHG---VVNKLLCPLWVGATCVMLPE-FSAQ----- 273

  Fly   270 VSKYKVTCLAMAPWQAYELFTS------------PLATSEQLE-------------------SLK 303
                          |.:|.|.|            |...|:.|:                   ..:
  Rat   274 --------------QVWEKFLSSEAPQINMFMAVPTIYSKLLDYYDRHFTQSHVQDFVRAVCKER 324

  Fly   304 IAFVIGGWISL--ALLRRAQELLPKTYVMFSYGTTETGVVTIN--IDHSLECSVGRLAPGMRIKI 364
            |..::.|..:|  .||.:.:.....| ::..||.||.|:...|  .:..:..|||...||:.::|
  Rat   325 IRLMVSGSAALPVPLLEKWKSATGHT-LLERYGMTEIGMALSNPLTEARVPGSVGTPLPGVEVRI 388

  Fly   365 QGE------------DGQQLGVNQT-------GEVLIDIGLKWEGYLSNPEDTATTL-QDGWINL 409
            ..|            :|...|...|       ||:|:.....::.|...||:|.:.. .|||...
  Rat   389 VSENPQKGSSYTIHAEGNMRGTKVTPGFEEKEGELLVKGPSVFQEYWDKPEETKSAFTPDGWFRT 453

  Fly   410 GDLGYFDEDNNLYLVDRKKDLLKYKSKHYWPNEIEQIIAELPEVEHVCVVGVRDARYGDAAGALI 474
            ||...|.:|..........|::|.........|||:.:...|.:..|.|:||.|..:|....|::
  Rat   454 GDTAVFKDDRYWIRGRTSVDIIKTGGYKVSALEIERHLLAHPSITDVAVIGVPDMTWGQRVTAVV 518

  Fly   475 IKKEGAEIADQKVIDHVAQRVVVDYKQLNAGVIFVDKFPKNANGKVMRSLAREVF 529
            ..:||..:: .:.:...|:.|:..| .:.:.::.|:..|:|..|||.:....:.|
  Rat   519 ALQEGHSLS-HRDLKEWARGVLAPY-AVPSELLLVEAIPRNQMGKVNKKQLLQQF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 123/575 (21%)
Firefly_Luc_like 49..521 CDD:213279 121/565 (21%)
Acsf3XP_574249.5 CaiC 49..572 CDD:223395 120/566 (21%)
MCS 55..564 CDD:213307 116/549 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.