DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and acs-2

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_506869.1 Gene:acs-2 / 3565680 WormBaseID:WBGene00009221 Length:618 Species:Caenorhabditis elegans


Alignment Length:582 Identity:128/582 - (21%)
Similarity:220/582 - (37%) Gaps:106/582 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YDHNTS--------VGQIVFNSLRCWPTNVIQITDDDGTVLTNADMLAYATRIALFFKSEGLTQE 83
            |.|.||        :||.:.|:....|.....:........|..:......::|....:.||.:.
 Worm    47 YIHGTSNIPLRNETLGQTLRNTTERVPDKEFCVFSKYPIRKTYEEFYHDVRQMAASLYTLGLEKG 111

  Fly    84 DRVGIIANSSTFVIPVATACFFQATPFHAVN--YSREPAIVQGLYSVTKPKIMFIDG-------- 138
            ||||:...:....:.:..||.|.......||  |..|.  ::.:...|..|::|...        
 Worm   112 DRVGVWGPNYYEWVVLQYACAFAGVIQVNVNPHYLHEE--LRFVMRKTGMKVLFAPKRHKHSNYV 174

  Fly   139 -------PDYDR----IKEITKEWSPKL--ITLTG---KVEGVTSIEDLV---------KPHPAE 178
                   |:..|    :..|.....|:|  |.|.|   .|.|.....||:         |....:
 Worm   175 HTMLEAMPEMRRGQPGVGHIKSHDIPELRHIVLYGDDVPVHGAWVYSDLIHAAGSAERAKLEDMD 239

  Fly   179 KIYVPASLATGGDQIAVVLCSSGTAGLPKAVALSHRHIASTNSLCISTDVLYTSATIDW------ 237
            :...|       |:...:..:|||.|.||...|:|        ..::.:..:....:.|      
 Worm   240 RKLRP-------DEPVNMQFTSGTTGHPKGATLTH--------FGLNNNAYFAGIRLGWDREDHR 289

  Fly   238 ---------MTGFSITVMN-LTCGFTRIISRRTFSAETALYLVSKYKVTCLAMAPWQAYELFTSP 292
                     ..|.::.|:| :..|.|.:...:::........:...|.|.:...|....::..||
 Worm   290 ICIPNPLYHCFGCAVGVINAVNHGQTVVFPSKSYHVPDIFEAIQNEKCTTMFGTPTMFIDVLKSP 354

  Fly   293 LATSEQLESLKIAFVIGGWISLALLRRAQELLPKTYVMFSYGTTETG-VVTINIDH----SLECS 352
            |.....:.||:...:.|....:||..:..:.:..|.....||:|||. :||::..|    ....|
 Worm   355 LMKQFDISSLRGGVIGGAPCPMALCEKMVKEMRMTDFSVIYGSTETSPLVTMSELHVDPFERIKS 419

  Fly   353 VGRLAPGMRIKIQGEDGQQLGVNQTGEVLIDIGLKWE-------GYLSNPEDTATTL-QDGWINL 409
            ||.:.|...:.|..|.|..:.....||:       |.       ||.::.:.|...: :|.|...
 Worm   420 VGSVMPHQELAIVDEFGVPVPTGAKGEL-------WSRGYSTMLGYWADHDKTNLAITRDRWYKS 477

  Fly   410 GDLGYFDEDNNLYLVDRKKDLLKYKSKHYWPNEIEQIIAELPEVEHVCVVGVRDARYGDAAGA-- 472
            ||....:||..:.:|.|.:|::....::.:|.||||.:.:|..|....||||.|.|||:...|  
 Worm   478 GDTATMNEDGTINIVGRTRDMIVKGGENVYPTEIEQFLHKLDYVADAHVVGVPDDRYGENICAWV 542

  Fly   473 -LIIKKEGAEIADQKVIDHVAQRVVVDYKQLNAGVIFVD-KFPKNANGKV----MRSLAREV 528
             |.::.||...|:.  |....:|.:..||.....:|..: :||...:|||    ::.:::|:
 Worm   543 RLRVEDEGKITAEH--IKKACKRGMAHYKVPKYVLIKKESEFPLTISGKVKKFEIQKISKEL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 128/582 (22%)
Firefly_Luc_like 49..521 CDD:213279 119/543 (22%)
acs-2NP_506869.1 PRK08315 46..609 CDD:236236 128/582 (22%)
FACL_like_2 244..595 CDD:213284 88/374 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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