DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and Fatp1

DIOPT Version :10

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster


Alignment Length:504 Identity:108/504 - (21%)
Similarity:195/504 - (38%) Gaps:85/504 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NTSVGQIVFNSLRCWPTNVIQITDDDGTVLTNADMLAYATRIALFFKSEGLTQEDRVG-IIANSS 93
            |.:|..:...:::..|..|..:::.........:  .:|.::|...:::|..:.|.|. ::.|.:
  Fly   175 NYTVADVFERNVQAHPDKVAVVSETQRWTFRQVN--EHANKVANVLQAQGYKKGDVVALLLENRA 237

  Fly    94 TFVIP-VATACFFQATPFHAVNYSREPAIVQGLYSVTKPKI-MFIDGPDY-DRIKEITKEWSPKL 155
            .:|.. :..:.....||....|. |.|::   |:|:|.... ..|.|.|: :.:.::.|: .|..
  Fly   238 EYVATWLGLSKIGVITPLINTNL-RGPSL---LHSITVAHCSALIYGEDFLEAVTDVAKD-LPAN 297

  Fly   156 ITL-----------TGK-VEGVTSIEDLVKPHPAEKIYVPASLATGGDQIAVVLCSSGTAGLPKA 208
            :||           |.| :....::..|:.....||   |...........|.:.:|||.|||||
  Fly   298 LTLFQFNNENNNSETEKNIPQAKNLNALLTTASYEK---PNKTQVNHHDKLVYIYTSGTTGLPKA 359

  Fly   209 VALSH-RHIASTNSLCIS-----TDVLYTSATIDWMTGFSITVMNLTCGFTRIIS-RRTFSAETA 266
            ..:|| |::.....:..:     .|:.||...: :.|...|..|..:..|...:| |:.|||...
  Fly   360 AVISHSRYLFIAAGIHYTMGFQEEDIFYTPLPL-YHTAGGIMCMGQSVLFGSTVSIRKKFSASNY 423

  Fly   267 LYLVSKYKVTC-LAMAPWQAYELFTSPLATSEQLESLKIAFVIGGWISLALLRRAQELLPKTYVM 330
            ....:||..|. ..:.....|.|.|.|   ||..:..::..|.|..:       ..::.|:....
  Fly   424 FADCAKYNATIGQYIGEMARYILATKP---SEYDQKHRVRLVFGNGL-------RPQIWPQFVQR 478

  Fly   331 FS-------YGTTETGVVTINIDHSL--------------ECSVGRLAPGMRIKIQGEDG--QQL 372
            |:       ||.||.....:|.|:::              ..|:.|..|.....|:..:|  |..
  Fly   479 FNIAKVGEFYGATEGNANIMNHDNTVGAIGFVSRILPKIYPISIIRADPDTGEPIRDRNGLCQLC 543

  Fly   373 GVNQTGEVLIDI-----GLKWEGYLSNPEDTATTLQD-------GWINLGDLGYFDEDNNLYLVD 425
            ..|:.|..:..|     ..::.||:.........::|       .:|: |||...||...||..|
  Fly   544 APNEPGVFIGKIVKGNPSREFLGYVDEKASAKKIVKDVFKHGDMAFIS-GDLLVADEKGYLYFKD 607

  Fly   426 RKKDLLKYKSKHYWPNEIEQIIAELPEVEHVCVVGV----RDARYGDAA 470
            |..|..::|.::...:|:|..::.:...:...|.||    .:.|.|.||
  Fly   608 RTGDTFRWKGENVSTSEVEAQVSNVAGYKDTVVYGVTIPHTEGRAGMAA 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 Firefly_Luc_like 49..521 CDD:341237 104/485 (21%)
Fatp1NP_001162940.3 hsFATP4_like 199..712 CDD:341262 104/480 (22%)

Return to query results.
Submit another query.