DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and Acsl1

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:574 Identity:127/574 - (22%)
Similarity:209/574 - (36%) Gaps:163/574 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ALFFKSEGLTQEDRVGIIANSSTFVIPVATACFFQATPFHAVNYSREPAIVQGLYS--------- 127
            ||..|......|..:||.:.:....:.:...||         .||   .:|..||.         
  Rat   137 ALIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCF---------TYS---MVVVPLYDTLGTDAITY 189

  Fly   128 -VTKPK--IMFIDGPDYDR--IKEITKEWSP--KLITLTG---------------KVEGVTSIED 170
             |.|.:  ::|.|.|:..:  ::.:..:.:|  |:|.:..               ::.|:.::||
  Rat   190 IVNKAELSVIFADKPEKAKLLLEGVENKLTPCLKIIVIMDSYDNDLVERGQKCGVEIIGLKALED 254

  Fly   171 L-----VKPHPAEKIYVPASLATGGDQIAVVLCSSGTAGLPKAVALSHRH--------IASTNSL 222
            |     .||.|.|.           :.:|::..:|||.|.||...::|::        |.:|.|.
  Rat   255 LGRVNRTKPKPPEP-----------EDLAIICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESA 308

  Fly   223 CIST--DVLYT-------------------SATIDWMTG----------------FSITVMNLTC 250
            .|::  |||.:                   .|.|.:..|                |.:....|..
  Rat   309 FIASPEDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTIFPVVPRLLNR 373

  Fly   251 GFTRIISRRTFSAET-ALYLVSKYKVTCLAMAPWQAYELFTSPLATSEQLESL---KIAFVIGGW 311
            .|.||..:...|.:. .|...||.|..          ||.:..:..:...:.|   ||...:||.
  Rat   374 MFDRIFGQANTSVKRWLLDFASKRKEA----------ELRSGIVRNNSLWDKLIFHKIQSSLGGK 428

  Fly   312 ISLALLRRAQELLPKTYVMF-----------SYGTTE-TGVVTINIDHSLECS-VGRLAPGMRIK 363
            :.|.:...|.  :..|.:.|           .||.|| |....:::....... ||...|...||
  Rat   429 VRLMITGAAP--VSATVLTFLRAALGCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIK 491

  Fly   364 -IQGEDGQQLGVNQTGEVLIDIGLKWEGYLSNPEDTATTL-QDGWINLGDLGYFDEDNNLYLVDR 426
             :..||.........|||.:.....::|||.:|..||..| :|||::.||:|.:..:..|.::||
  Rat   492 LVDVEDMNYQAAKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDR 556

  Fly   427 KKDLLKYKSKHY-WPNEIEQIIAELPEVEHVCVVGVRDARYGDAAGALIIKKEGAEIADQKVIDH 490
            ||.:.|.....| .|.:||.|......|..|.|       :|::..|.:|   ...:.|.:::..
  Rat   557 KKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFV-------HGESLQAFLI---AIVVPDVEILPS 611

  Fly   491 VAQR--------VVVDYKQLNAGVI-FVDKFPKNANGKVMRSLAREVFEKTKPI 535
            .||:        .:...|.:|..:: .:.|..|||..|        .||:.|.|
  Rat   612 WAQKRGFQGSFEELCRNKDINKAILEDMVKLGKNAGLK--------PFEQVKGI 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 124/568 (22%)
Firefly_Luc_like 49..521 CDD:213279 123/558 (22%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 127/574 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342965
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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