DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and Acsm2

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_653349.1 Gene:Acsm2 / 246263 RGDID:708383 Length:572 Species:Rattus norvegicus


Alignment Length:598 Identity:133/598 - (22%)
Similarity:220/598 - (36%) Gaps:141/598 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PTFFNKETQV---WSG-------PPRPTVYDHNTSVGQIVFNSLRCWPTNVIQITDDDGTVLTNA 62
            |..||..:.|   |:.       .|.|.::..|.|..::.:|.     ..:.:|:.....|||.|
  Rat    41 PAKFNFASDVIDHWASLEKAGKRSPGPALWWMNGSGEELKWNF-----RELSEISKQTANVLTGA 100

  Fly    63 DMLAYATRIALFFKSEGLTQEDRVGIIANSSTFVIP-------VATACFFQATPF---------- 110
            .               ||.:.|||.:       |:|       |...|......|          
  Rat   101 C---------------GLQRGDRVAV-------VLPRVPEWWLVTLGCMRSGLVFMPGTTQMKST 143

  Fly   111 ---HAVNYSREPAIVQGLYSVTKPKIMFID--GPDYDRIKEITKEWSPKLITLTGKVEGVTSIED 170
               :.:..|:..|||.|     ...:..:|  .||...:|       .||:......||..:.:.
  Rat   144 DILYRLQSSKARAIVAG-----DEVVQEVDAVAPDCSFLK-------IKLLVSEKNREGWLNFKA 196

  Fly   171 LVKPHPAEKIYVPASLATGGDQIAVVLCSSGTAGLPKAVALSHRHIASTNSLCIS------TDVL 229
            |:|  .|..|:  ..:.|...:.|.:..:|||:|.||....||..:.....:...      :|.:
  Rat   197 LLK--DASPIH--QCVETVSQESAAIYFTSGTSGPPKMAEHSHCSLGLKAKMDAGWTGLGPSDTM 257

  Fly   230 YTSATIDWMTGFSITVMNL-----------TCGFTRIISRRTFSAETALYLVSKYKVTCLAMAPW 283
            :|.:...|       ::|:           ||.|..::.:  |..:|.|.::|.|.:..|..|| 
  Rat   258 WTISDTGW-------ILNILGSFLEPWVLGTCIFVHLLPK--FDPQTVLKVLSSYPINTLLGAP- 312

  Fly   284 QAYELFTSPLATSEQLESLKIAFVIGGWISLALLRRAQELLPKTYVMFS----------YGTTET 338
            ..|.:......:|.:...|...| .||          :.|||:|...:.          ||.|||
  Rat   313 LIYRMLLQQDLSSYKFPHLHSCF-SGG----------ETLLPETLESWKAKTGLEIREIYGQTET 366

  Fly   339 GVVTINIDHSLECSVGRLAPGM---RIKIQGEDGQQLGVNQTGEVLI------DIGLKWEGYLSN 394
            | :|..:..:::...|.|...:   .:::..|.|..|...:.|::.:      .||: :.||:.|
  Rat   367 G-ITCRVSRTMKVKPGYLGTAIVPYDVQVIDEQGNVLPPGKEGDMALRVKPIRPIGM-FSGYVDN 429

  Fly   395 PEDTATTLQ-DGWINLGDLGYFDEDNNLYLVDRKKDLLKYKSKHYWPNEIEQIIAELPEVEHVCV 458
            |:.|...:: |.|: |||.|..|.:...:.:.|..|::........|:|:|..:.|.|.|....|
  Rat   430 PKKTQANIRGDFWL-LGDRGIKDTEGYFHFMGRTDDIINSSGYRIGPSEVENALMEHPAVVETAV 493

  Fly   459 VGVRDARYGDAAGALIIKKEGAEIADQ----KVIDHVAQRVVVDYKQLNAGVIFVDKFPKNANGK 519
            :...|....:...|.::........||    ||:....:.|...||.... |.||...||...||
  Rat   494 ISSPDPIRREVVKAFVVLAPEFLSHDQDQLTKVLQEHVKSVTAPYKYPRK-VEFVLDLPKTITGK 557

  Fly   520 VMRSLAREVFEKT 532
            :.|:..|....||
  Rat   558 IERAKLRAKEWKT 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 126/572 (22%)
Firefly_Luc_like 49..521 CDD:213279 119/534 (22%)
Acsm2NP_653349.1 AFD_class_I 40..568 CDD:302604 131/594 (22%)
Acs 40..565 CDD:223442 130/591 (22%)
Coenzyme A binding. /evidence=ECO:0000250 469..471 0/1 (0%)
Coenzyme A binding. /evidence=ECO:0000250 540..542 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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