DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and acs-18

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_501893.1 Gene:acs-18 / 177918 WormBaseID:WBGene00011173 Length:700 Species:Caenorhabditis elegans


Alignment Length:480 Identity:103/480 - (21%)
Similarity:175/480 - (36%) Gaps:138/480 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 QEDRVGIIANS--STFVIPVATACFFQ-ATPFHAVNYSREPAIVQGLYSVTKPKIMFIDG----- 138
            :|.::||.:|:  ...:..:|...|.. :.|.:....:.:...:..|..::   :||:|.     
 Worm   140 EESKIGIYSNNRPEWILSEMAIHNFSNVSVPLYDTITNDDMHYITNLCEIS---LMFVDAEIKTK 201

  Fly   139 -----PDY--------------DRIKEITKE-----WSPKLITLTGKVEGVTSIEDLVKPHPAEK 179
                 ..|              |.|||:.:|     ||.......||       :...:||    
 Worm   202 QLIRDKSYLSSLKYIVQFNECSDDIKEMARENDFRLWSFNEFVEMGK-------KQKHRPH---- 255

  Fly   180 IYVPASLATGGDQIAVVLCSSGTAGLPKAVALSHRHIASTNSLCISTD----------------- 227
              ||.:..|    :|.:..:|||.|.||.|.|:|.::.|....|...:                 
 Worm   256 --VPPTPET----LATISFTSGTTGRPKGVMLTHLNMCSATMSCEEFENEAGVQDAYLSYLPLAH 314

  Fly   228 -----VLYTSATIDWMTGFSITVMNLTCGFTRIISRRTFSAETALYLVSKY-------------- 273
                 .|.::..|....|||.....|.....:.::.|:|:  |...::.|.              
 Worm   315 IYERLCLLSNFMIGSRIGFSRGDPKLLVDDVQALAPRSFA--TVPRVIDKIHKAVMKQVQDKPLK 377

  Fly   274 KVTCLAMAPWQAYELFTSPLATSEQLESLKIAFVIGGWISLALLRRAQELLPKTY---------- 328
            |:...|...::.|....:..||.:.            |:...:|.:.|.||....          
 Worm   378 KMILNAAIAYKLYHYKMTGKATRKT------------WVDKYVLHKIQMLLGPNIRQLILGAAKS 430

  Fly   329 ---------------VMFSYGTTET-GVVTINI--DHSLECSVGRLAPGMRIKIQGEDGQQLGVN 375
                           |:..||.||| |..|:.:  |..:.|....:|..| ||:  .|..:||.:
 Worm   431 DVSAMRFARGAFGVEVLEGYGQTETSGPTTLQLVGDTRIGCVGPPMACAM-IKL--IDVPELGYS 492

  Fly   376 ---QTGEVLIDIGLKWEGYLSNPEDTATTL-QDGWINLGDLGYFDEDNNLYLVDRKKDLLKY-KS 435
               ..||||:.......||..|||.||::. :||::..||:|.|..:.:|.::||:|::.|. :.
 Worm   493 VDKNGGEVLVKGHNVTSGYYKNPEATASSFTEDGYMKTGDIGRFTAEGSLQIIDRRKNVFKMPQG 557

  Fly   436 KHYWPNEIEQIIAELPEVEHVCVVG 460
            |...|:..|.:......|:.:.|.|
 Worm   558 KFVAPDLTESLYTSSSFVQQIYVHG 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 103/480 (21%)
Firefly_Luc_like 49..521 CDD:213279 103/480 (21%)
acs-18NP_501893.1 LC-FACS_euk 111..688 CDD:341250 103/480 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160557
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.