DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4563 and acs-16

DIOPT Version :9

Sequence 1:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_490859.1 Gene:acs-16 / 171714 WormBaseID:WBGene00018579 Length:569 Species:Caenorhabditis elegans


Alignment Length:578 Identity:133/578 - (23%)
Similarity:238/578 - (41%) Gaps:108/578 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PPRPTVYDHNTSVGQIVFNSLRCWPTNVIQITDDDGTVLTNADMLAYATRIALFFKSEGLTQEDR 85
            ||:...:|..| :.|:::.....  ..|..:.|.:...||.:.:::....:|..|.|.||.|.||
 Worm    25 PPKQIDFDSQT-IPQLIYTKSEM--DRVAAVFDSEKLSLTFSKIVSEMESLAAGFLSIGLKQGDR 86

  Fly    86 VGIIANSSTFVIPVATAC------FFQATPFHAVNYSREPAIVQGLYSVTKPKIMFIDGPDY--D 142
            |.:..::.:.|:..|.||      |..|.|.:..:||.:.|:..|.:..    |:......|  |
 Worm    87 VLVAGSNHSQVMLCALACSRAGLVFSLANPNYPNSYSLKRALELGEFQC----IVCFRAHQYEAD 147

  Fly   143 RIKEITKEWSPKLI-------------TLT--------GKVEGVTSIEDLVKPHPAEKI-YVPAS 185
            .:..:..|.:|:|:             .||        .|..|..::.::......||| .:|..
 Worm   148 HLNNLLLEIAPELMRSRKGQLKSELLPKLTHVILAEEDHKHAGTFTLSEVFLKSSKEKIAKLPDF 212

  Fly   186 LATGGDQIAVVLCSSGTAGLPKAVALSH-------RHIASTNSLCISTDVLYTSATIDWMTGFSI 243
            ......::|.:..:.||.|.||.:||||       |.:|:...: ....||..:..|     |.|
 Worm   213 SKWSSHKLACLQFTLGTTGAPKLIALSHYQMLNGARAVAAAFGI-NDKHVLACALPI-----FRI 271

  Fly   244 TVMNLTC-----GFTRII-------SRRTFSAETALYLVSKYKVTCLAMAPWQAYELFTSPLATS 296
            .:.||.|     ...|||       .:..||:      ||||:.|.| ::...|..|......|.
 Worm   272 AIFNLICLSPFLTECRIIFPDATPLPKNLFSS------VSKYRCTTL-LSNGAALRLLLKISQTQ 329

  Fly   297 E-QLESLKIAFVIGGWISLALLR----RAQELLPKTYVMFSYGTTETGVVTINIDHSLEC--SVG 354
            . :|.:|:...:||..:|..:|:    :|:.:   ..:...|..||||.:.:..|.:.:.  :||
 Worm   330 RVKLSALENILLIGDRVSKEVLKLIKVQAENV---KIIAVGYLLTETGSIPLMGDQNSDFTRNVG 391

  Fly   355 RLAPGMRIKIQGEDG--QQLGVNQTGEVLIDI--GLKWEGYLSNPEDTATTLQDGWINLGDLGYF 415
            :...|....:...||  .|:...:.|::||.:  |..:.||..:     |..::.|::.||:|..
 Worm   392 KAIAGYEAHLIPLDGSENQVETGKLGKLLIRVYYGSTFMGYAPD-----TKGKEKWVDTGDIGRM 451

  Fly   416 DEDNNLYLVDRKKDLLKYKSK---HYWPNEIEQIIAELPEVEHVCVVGVRDARYGDAAGALIIKK 477
            ||:..:.:|..:.||:..|:.   .:|  .:|:::.:...::.|.||   ....|....|:.:.:
 Worm   452 DENGAIEVVASEDDLIYDKNNCLVEHW--NLERLLNQNDLIKGVQVV---SRGRGQPVTAVCVAR 511

  Fly   478 ----EGAEIADQ-KVIDHVAQRVVVDYKQLNAGVIFVDKFPKNANGKVMRSLAREVFE 530
                ..|::.|: |.:......|..|.      ..|||.||: .:.|:.:...|.:.|
 Worm   512 STQFHAAKLKDELKSMCRSHHFVAPDV------FAFVDDFPR-VHTKIQKFRIRAMLE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4563NP_611913.1 CaiC 21..531 CDD:223395 133/578 (23%)
Firefly_Luc_like 49..521 CDD:213279 125/539 (23%)
acs-16NP_490859.1 CaiC 35..565 CDD:223395 130/568 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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