DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCNS3 and CG43155

DIOPT Version :10

Sequence 1:NP_002243.3 Gene:KCNS3 / 3790 HGNCID:6302 Length:491 Species:Homo sapiens
Sequence 2:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster


Alignment Length:215 Identity:47/215 - (21%)
Similarity:90/215 - (41%) Gaps:45/215 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   207 MSEFQNEDGEVDDPVLEGVEIACIAWFTGELAVRLAAAPCQKKFWKNPLNIIDFVSIIPFYATLA 271
            :.:.::.|..||  ..||..:|     .|....|.:.|..|...||:.||.|..:..:..|..:.
  Fly    22 LEKLKHLDRRVD--AAEGGGLA-----KGTAGGRRSTACWQSMKWKSALNHIGLLVSLSIYCGVG 79

Human   272 --VDTKEEESEDIENMGKVVQILRLMRIFRILKLARHSVGLRSLGATLRHSYHEVGLLLLFLSVG 334
              :....|...::|.:..:..|::..| .|.|    |::    |..|..|:..|:      ||..
  Fly    80 GLIFRHLERPAEVERLSHLKDIVKTHR-ERFL----HTI----LNNTEVHNLDEL------LSFE 129

Human   335 ISIFSV---------LIYSVEKD-----DHTSSLTSIPICWWWATISMTTVGYGDTHPVTLAGKL 385
            ::.:..         |:...:||     :..|.|.::    ::::..:||:|||:..|||..|::
  Fly   130 LAKYEAAVQQAAEGGLLIVADKDFPEPYERWSILQAV----FFSSTVLTTIGYGNIVPVTTGGRV 190

Human   386 IASTCIICGILVVALPITII 405
            .   ||...::.:...:|:|
  Fly   191 F---CICFALIGIPFTLTVI 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNS3NP_002243.3 BTB_POZ_KCNS3 15..122 CDD:349735
Ion_trans 184..417 CDD:459842 47/215 (22%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 3/4 (75%)
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 18/72 (25%)
Ion_trans_2 <267..319 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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