DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgam5-2 and ytjC

DIOPT Version :10

Sequence 1:NP_611911.1 Gene:Pgam5-2 / 37899 FlyBaseID:FBgn0035004 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_418812.1 Gene:ytjC / 948918 ECOCYCID:EG12164 Length:215 Species:Escherichia coli


Alignment Length:217 Identity:60/217 - (27%)
Similarity:88/217 - (40%) Gaps:58/217 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 IILVRHGE-------YTRTPNGSHLTELGRRQAERTGQRLREMGLSWDHVVASTMPRAEETAMII 138
            :.||||||       ..:..:.|.||..|.:||.:...|.:|:|::  |:::|.:.|...||.||
E. coli     4 VYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGIT--HIISSDLGRTRRTAEII 66

  Fly   139 -------------LKQLNLDPLKMKRCTLLPE-----------GTPYPGDPPSKRSARSLDLAYQ 179
                         |::||:..|:.:....|.|           || ..|..|...|.:.|     
E. coli    67 AQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGT-VDGRIPEGESMQEL----- 125

  Fly   180 RDGPRIEAAFRRYFFRASPEQEHDSYLLIVGHSNVIRYLILRALQLPPAAWTRLNLNHGSIT--- 241
              ..|:.||...  .|..|:   .|..|:|.|...:..|:...|.||..|..||.|.:.||:   
E. coli   126 --SDRVNAALES--CRDLPQ---GSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSISRVD 183

  Fly   242 -----WLTVWPSGYVTLRCLGD 258
                 ||.   ||:| :...||
E. coli   184 YQESLWLA---SGWV-VETAGD 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgam5-2NP_611911.1 HP <55..270 CDD:472174 60/217 (28%)
ytjCNP_418812.1 PRK03482 1..215 CDD:179583 60/217 (28%)

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