DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgam5-2 and AT3G50520

DIOPT Version :9

Sequence 1:NP_611911.1 Gene:Pgam5-2 / 37899 FlyBaseID:FBgn0035004 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_190621.1 Gene:AT3G50520 / 824216 AraportID:AT3G50520 Length:230 Species:Arabidopsis thaliana


Alignment Length:224 Identity:58/224 - (25%)
Similarity:92/224 - (41%) Gaps:62/224 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 IILVRHGEYT----RTPNGS---HLTELGRRQAERTGQRL-REMGLSWDHVVASTMPRAEETAMI 137
            |::|||||.:    |...|.   .|.:.||:||:|..:|| :|..:|  ||.:|.:.||.|||.|
plant    16 IVVVRHGETSWNAERKIQGHLDVELNDAGRQQAQRVAERLSKEQKIS--HVYSSDLKRAFETAQI 78

  Fly   138 I--------------LKQLNLDPLK----MKRCTLLPEG----------TPYPGDPPSKRSARSL 174
            |              |::.:|..::    .:...:.||.          ...||      ...||
plant    79 IAAKCGKLEVLTDRDLRERHLGDMQGLVYQEASKIRPEAYKAFSSNRTDVDIPG------GGESL 137

  Fly   175 DLAYQRDGPRIEAAFRRYFFRASPEQEHDSYLLIVGHSNVIRYLILRALQLPPAAWTRLNLNHGS 239
            |..|.    |...|.:|...:...|:     :::|.|..|||.|..||   .|:|.....:.:.|
plant   138 DKLYD----RCTTALQRIGDKHKGER-----IVVVTHGGVIRSLYERA---RPSARKVEKILNTS 190

  Fly   240 ITWLTVWPSGYVTLRCLGD------SGFM 262
            :....::.....|::..||      :||:
plant   191 VNVFRLFDGDKWTIQVWGDVSHLEETGFL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgam5-2NP_611911.1 HP_PGM_like 80..245 CDD:132718 53/199 (27%)
AT3G50520NP_190621.1 His_Phos_1 16..210 CDD:395236 55/213 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1112626at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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