DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15873 and scaf

DIOPT Version :9

Sequence 1:NP_611910.2 Gene:CG15873 / 37898 FlyBaseID:FBgn0035003 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster


Alignment Length:215 Identity:55/215 - (25%)
Similarity:96/215 - (44%) Gaps:41/215 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 VRHRGDNHFCSGVLVSSRAVLTAAHC-----LTD-RYKASMNPRGIRVVFGHITRLAVYDESDFR 118
            :|.......|.|.::..:.||::|.|     :|| |.||.      ....|.......:..:..:
  Fly   441 LRESSKTLICGGAIIGDQFVLSSASCVNGLPVTDIRVKAG------EWELGSTNEPLPFQLTGVK 499

  Fly   119 SVDRLVVHPEYE-RYKKNDLAILRLSERVQSSNHDVLPLLMRKTANVTYGDTCITLGWGQ----I 178
            :||   |||:|: ....:||||:||..|::.::| :.|:.: ...:....:.|.|.|||:    |
  Fly   500 TVD---VHPDYDPSTNSHDLAIIRLERRLEFASH-IQPICI-SDEDPKDSEQCFTSGWGKQALSI 559

  Fly   179 YQHGPYSNELVYL-DVILRPPSLCQKHYDTFTAD-HNVCTEPVGESMNCAGDMGGPLLCKGA--- 238
            ::.|    .|::: |.:.:..|.|       :|| .:||:....:|  |..|:|..|.|...   
  Fly   560 HEEG----ALMHVTDTLPQARSEC-------SADSSSVCSATKFDS--CQFDVGSALACGSGSSV 611

  Fly   239 -LFGLIGGHMGCAGGKAMKF 257
             |.|:..|...|..|:.::|
  Fly   612 RLKGIFAGENSCGEGQTVRF 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15873NP_611910.2 Tryp_SPc 36..250 CDD:214473 52/206 (25%)
Tryp_SPc 59..250 CDD:238113 52/206 (25%)
scafNP_610180.1 FtsK <198..>334 CDD:332908
Tryp_SPc 428..616 CDD:238113 50/198 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435416
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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