DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15873 and Gzmm

DIOPT Version :10

Sequence 1:NP_611910.2 Gene:CG15873 / 37898 FlyBaseID:FBgn0035003 Length:297 Species:Drosophila melanogaster
Sequence 2:XP_063119183.1 Gene:Gzmm / 29252 RGDID:620022 Length:266 Species:Rattus norvegicus


Alignment Length:223 Identity:71/223 - (31%)
Similarity:108/223 - (48%) Gaps:45/223 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TVFLGLILSTSLSDADLGVIGDISDETFEMLISGGYK--PKSNRLSRHVVSIR-TKNYVRHRGDN 66
            ::.|.|.|.|      |..:|:    .||..|.||.:  |.|.   .::||:: ||        :
  Rat     6 SLLLLLALKT------LWAVGN----RFEAQIIGGREAVPHSR---PYMVSLQNTK--------S 49

  Fly    67 HFCSGVLVSSRAVLTAAHCLTDRYKASMNPRGIRVVFG-HITRLAVYDESD----FRSVDRLVVH 126
            |.|.||||..:.||||||||::..:.      :::||| |    :::|..|    | .:.:.:.|
  Rat    50 HVCGGVLVHQKWVLTAAHCLSEPLQQ------LKLVFGLH----SLHDPQDPGLTF-YIKQAIKH 103

  Fly   127 PEYERYKKNDLAILRLSERVQSSNHDVLPL-LMRKTAN-VTYGDTCITLGWGQIYQHGPYSNELV 189
            |.|....:||||:|:|..||:.|. :|.|| |.||..: ...|..|.|.|||..:|.|..:..|.
  Rat   104 PGYNLKYENDLALLKLDGRVKPSK-NVKPLALPRKPRDKPAEGSRCSTAGWGITHQRGQLAKSLQ 167

  Fly   190 YLDVILRPPSLC--QKHYDTFTADHNVC 215
            .||:.|....:|  .:.::....|..:|
  Rat   168 ELDLRLLDTRMCNNSRFWNGVLTDSMLC 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15873NP_611910.2 Tryp_SPc 59..250 CDD:238113 54/166 (33%)
GzmmXP_063119183.1 None

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