DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15873 and CG43110

DIOPT Version :9

Sequence 1:NP_611910.2 Gene:CG15873 / 37898 FlyBaseID:FBgn0035003 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster


Alignment Length:263 Identity:63/263 - (23%)
Similarity:105/263 - (39%) Gaps:50/263 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LISGGYKPKSNRLSRHVVSIRTKNYVRHRGDNHFCSGVLVSSRAVLTAAHCLTDRYKASMNPRGI 99
            :|||  ...|.:.::::..|....::       .|.|.::....|||.|||           :..
  Fly    36 IISG--SNASQQSAQYMAGIFNTTHL-------LCGGTIIHEDFVLTVAHC-----------KST 80

  Fly   100 RVVFGHITRLAVYD---ESDFRSVDRLVVHPEYERYK-KNDLAILRLSERVQSSNHDVLPLLMRK 160
            :.:|   .||..|:   .:|...|...:.||:|.... .||:|:::| ||....|.::.|:.:..
  Fly    81 QTLF---VRLGAYNINHPTDQIRVIETIAHPQYSNSTYANDIALVKL-ERSVIFNLNIQPICIHL 141

  Fly   161 TA----NVTYGDTCITLGWGQIYQHGPYSNELVYLDVILRPPSLCQKHYDTFTADHNVC-TEPVG 220
            .|    .:.|.:   ..|||:. ::...|:.|..:.|....|.:|..:.........:| |...|
  Fly   142 DATLGKQIRYYN---AFGWGRT-RNAEQSDILQRIFVNRTNPMICHLYLGMSPDPKQICATTDQG 202

  Fly   221 ESMNCAGDMGGPLLCK--------GALFGLIG-GHMGCAGGKAMKFLSFLYYKDWILLTIQSLSD 276
            ::  ||||.||||:.|        ...||:.. |...|.|  ...:.....|..||...::|..|
  Fly   203 DT--CAGDSGGPLISKITYQGKNFDTQFGITSYGTRECNG--VGLYTDVSQYSGWIANIVRSKQD 263

  Fly   277 CGV 279
            ..|
  Fly   264 RSV 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15873NP_611910.2 Tryp_SPc 36..250 CDD:214473 55/231 (24%)
Tryp_SPc 59..250 CDD:238113 50/208 (24%)
CG43110NP_001246396.1 Tryp_SPc 35..254 CDD:214473 58/249 (23%)
Tryp_SPc 36..257 CDD:238113 60/252 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436742
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.