DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42383 and Nsfl1c

DIOPT Version :9

Sequence 1:NP_523847.2 Gene:CG42383 / 37897 FlyBaseID:FBgn0259729 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_006235316.1 Gene:Nsfl1c / 83809 RGDID:619952 Length:372 Species:Rattus norvegicus


Alignment Length:383 Identity:120/383 - (31%)
Similarity:179/383 - (46%) Gaps:60/383 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDEQK--LSTFMKRHGVREEVARQYLSSNNWSLEVA-SSTYE----SEAVSKKQEPEKSSEHSQ 58
            |.:|::  |..|:...|..|:.||.:|.|..|.|::| :|.||    .:.|:..|....|.....
  Rat     1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDGGDEDIVTISQATPSSVSRGT 65

  Fly    59 ANESN-----RDLHSLLSEISRRKEGDHDGYQACASDSS------------------------TD 94
            |...|     |||.....|....:||....:.|..|:.|                        .:
  Rat    66 APSDNRVTSFRDLIHDQDEEEEEEEGQRSRFYAGGSERSGQQIVGPPRKKSPNELVDDLFKGAKE 130

  Fly    95 HDTPAGKRVNINSSTPAITNNDSDRSLRVWGHGNRLGSAHPINPPPRSATEDSDTEPADDEHTIV 159
            |...|.:||   :.:|..|:.....:    |.|.|||:|    |...||....:......:...|
  Rat   131 HGAVAVERV---TKSPGETSKPRPFA----GGGYRLGAA----PEEESAYVAGERRRHSGQDVHV 184

  Fly   160 VLHLWSEGFSLDDGSLRLYALPENERFLRAILRGDFPEEMLRVP---RVQLSVQDHTNESY--RH 219
            ||.||..|||||:|.||.|..|.|.:||.:|.||:.|.|:.|:.   :|.|.::||.:|.:  ..
  Rat   185 VLKLWKTGFSLDNGDLRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMEDHRDEDFVKPK 249

  Fly   220 LSRKQFMGPGRPLNSPSPQILVVGPMPVEAQ-------GLQLNERADTTTVQLRMADGSRVAGRF 277
            .:.|.|.|.|:.|.|.:||:|.......:|:       .:.:||...||.:|:|:|||.|:..:|
  Rat   250 GAFKAFTGEGQKLGSTAPQVLNTSSPAQQAENEAKASSSILINEAEPTTNIQIRLADGGRLVQKF 314

  Fly   278 NLTHNVGDLYQYARLARPEFSDRSFVLMTAFPRQELVESDTRTLVQANLCNVVVIQHL 335
            |.:|.:.|:..:...|||..:..||||||.||.:||.: :.:||.:|||.|.|::|.|
  Rat   315 NHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELAD-ENQTLKEANLLNAVIVQRL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42383NP_523847.2 UBA_TAP-C_like 10..39 CDD:270459 11/29 (38%)
SEP 155..242 CDD:197786 38/91 (42%)
p47_UBX 257..336 CDD:176365 34/79 (43%)
Nsfl1cXP_006235316.1 UBA_p47 7..45 CDD:270533 14/37 (38%)
SEP 180..272 CDD:197786 38/91 (42%)
p47_UBX 294..372 CDD:176365 34/79 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336917
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2086
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54012
OrthoDB 1 1.010 - - D1175850at2759
OrthoFinder 1 1.000 - - FOG0001623
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102041
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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