DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42383 and nsfl1c

DIOPT Version :10

Sequence 1:NP_523847.2 Gene:CG42383 / 37897 FlyBaseID:FBgn0259729 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001007447.1 Gene:nsfl1c / 492805 ZFINID:ZDB-GENE-041114-160 Length:372 Species:Danio rerio


Alignment Length:382 Identity:122/382 - (31%)
Similarity:180/382 - (47%) Gaps:65/382 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EQKLSTFMKRHGVREEVARQYLSSNNWSLEVASSTY---------------ESEAVSKKQEPEKS 53
            |:.:..|:....|.||.||.:|.|..|.|::|.:.:               ||.:|::   |...
Zfish     5 EEAVRGFVAVTDVDEERARFFLESAGWDLQLALANFFEDGGEDDIATLPQPESGSVTR---PTGP 66

  Fly    54 SEHSQANESNRDLHSLLSEISRRKEGDHDGYQACASDSSTDHDTPAG--KRVNINSSTPAITN-- 114
            |||...  |.|||.....:.|    ||.:|.:..|..|........|  |:.|.|.....:..  
Zfish    67 SEHRVT--SFRDLMHEDDDDS----GDEEGQRFFAGGSERSGQQIVGPPKKKNSNELIEDLFKGA 125

  Fly   115 ---------------NDSDRSLRVWGHGNRLGSAHPINPPPRSAT--EDSDTEPADDEHTI-VVL 161
                           .:|.:|....|.|.|||:|     |...:|  ..:..:|...:..: |||
Zfish   126 KEHGAVPVDKAGKGLGESSKSKPFGGGGYRLGAA-----PEEESTYVAGARRQPGSSQDQVHVVL 185

  Fly   162 HLWSEGFSLDDGSLRLYALPENERFLRAILRGDFPEEM---LRVPRVQLSVQDHTNESYR--HLS 221
            .||..|||||:|.||.|:.|||..||.:|.||:.|.|:   .|..:|.|.::||.:|.:.  .|:
Zfish   186 KLWKTGFSLDEGELRTYSDPENALFLESIRRGEIPLELRQRFRGGQVNLDMEDHRDEDFSKPRLA 250

  Fly   222 RKQFMGPGRPLNSPSPQILVVGPMPVEAQGLQLNERA----DT----TTVQLRMADGSRVAGRFN 278
            .|.|.|.|:.|.|.:|:::.:...|.:....:....|    ||    |::|:|:|||.|:..:||
Zfish   251 FKAFTGEGQKLGSATPELVSLQRSPQDQAASEAEASASISVDTSQPITSIQIRLADGGRLVQKFN 315

  Fly   279 LTHNVGDLYQYARLARPEFSDRSFVLMTAFPRQELVESDTRTLVQANLCNVVVIQHL 335
            .||.|.|:.|:|..|||..:...|||||.||.:||.: :..||.:|||.|.|::|.|
Zfish   316 HTHRVSDVRQFAASARPALAATEFVLMTTFPNKELTD-EGLTLKEANLLNAVIVQRL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42383NP_523847.2 UBA_TAP-C_like 10..39 CDD:270459 11/28 (39%)
SEP 155..242 CDD:197786 38/92 (41%)
UBX_UBXN2 262..334 CDD:340468 33/71 (46%)
nsfl1cNP_001007447.1 UBA_p47 5..44 CDD:270533 12/38 (32%)
SEP 181..270 CDD:197786 38/88 (43%)
Ubl1_cv_Nsp3_N-like 291..372 CDD:475130 38/82 (46%)

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