DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42383 and nsfl1c

DIOPT Version :9

Sequence 1:NP_523847.2 Gene:CG42383 / 37897 FlyBaseID:FBgn0259729 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001007447.1 Gene:nsfl1c / 492805 ZFINID:ZDB-GENE-041114-160 Length:372 Species:Danio rerio


Alignment Length:382 Identity:122/382 - (31%)
Similarity:180/382 - (47%) Gaps:65/382 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EQKLSTFMKRHGVREEVARQYLSSNNWSLEVASSTY---------------ESEAVSKKQEPEKS 53
            |:.:..|:....|.||.||.:|.|..|.|::|.:.:               ||.:|::   |...
Zfish     5 EEAVRGFVAVTDVDEERARFFLESAGWDLQLALANFFEDGGEDDIATLPQPESGSVTR---PTGP 66

  Fly    54 SEHSQANESNRDLHSLLSEISRRKEGDHDGYQACASDSSTDHDTPAG--KRVNINSSTPAITN-- 114
            |||...  |.|||.....:.|    ||.:|.:..|..|........|  |:.|.|.....:..  
Zfish    67 SEHRVT--SFRDLMHEDDDDS----GDEEGQRFFAGGSERSGQQIVGPPKKKNSNELIEDLFKGA 125

  Fly   115 ---------------NDSDRSLRVWGHGNRLGSAHPINPPPRSAT--EDSDTEPADDEHTI-VVL 161
                           .:|.:|....|.|.|||:|     |...:|  ..:..:|...:..: |||
Zfish   126 KEHGAVPVDKAGKGLGESSKSKPFGGGGYRLGAA-----PEEESTYVAGARRQPGSSQDQVHVVL 185

  Fly   162 HLWSEGFSLDDGSLRLYALPENERFLRAILRGDFPEEM---LRVPRVQLSVQDHTNESYR--HLS 221
            .||..|||||:|.||.|:.|||..||.:|.||:.|.|:   .|..:|.|.::||.:|.:.  .|:
Zfish   186 KLWKTGFSLDEGELRTYSDPENALFLESIRRGEIPLELRQRFRGGQVNLDMEDHRDEDFSKPRLA 250

  Fly   222 RKQFMGPGRPLNSPSPQILVVGPMPVEAQGLQLNERA----DT----TTVQLRMADGSRVAGRFN 278
            .|.|.|.|:.|.|.:|:::.:...|.:....:....|    ||    |::|:|:|||.|:..:||
Zfish   251 FKAFTGEGQKLGSATPELVSLQRSPQDQAASEAEASASISVDTSQPITSIQIRLADGGRLVQKFN 315

  Fly   279 LTHNVGDLYQYARLARPEFSDRSFVLMTAFPRQELVESDTRTLVQANLCNVVVIQHL 335
            .||.|.|:.|:|..|||..:...|||||.||.:||.: :..||.:|||.|.|::|.|
Zfish   316 HTHRVSDVRQFAASARPALAATEFVLMTTFPNKELTD-EGLTLKEANLLNAVIVQRL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42383NP_523847.2 UBA_TAP-C_like 10..39 CDD:270459 11/28 (39%)
SEP 155..242 CDD:197786 38/92 (41%)
p47_UBX 257..336 CDD:176365 39/87 (45%)
nsfl1cNP_001007447.1 UBA_p47 5..44 CDD:270533 12/38 (32%)
SEP 181..270 CDD:197786 38/88 (43%)
p47_UBX 294..372 CDD:176365 36/79 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576056
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2086
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54012
OrthoDB 1 1.010 - - D1175850at2759
OrthoFinder 1 1.000 - - FOG0001623
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102041
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.710

Return to query results.
Submit another query.