DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG42383 and ubxn2b

DIOPT Version :9

Sequence 1:	NP_523847.2	Gene:	CG42383 / 37897	FlyBaseID:	FBgn0259729	Length:	353	Species:	Drosophila melanogaster
Sequence 2:	XP_004915243.2	Gene:	ubxn2b / 101733824	XenbaseID:	XB-GENE-13579709	Length:	351	Species:	Xenopus tropicalis

Alignment Length:	244	Identity:	85/244 - (34%)
Similarity:	131/244 - (53%)	Gaps:	25/244 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   111 AITNNDSDRSLRVW-------GHGNRLGSAHPINPPPRSATEDSDTEPADDEHTI-VVLHLWSEG 167
            ||..:|:.:|...:       |.|.:||     |...|........||.:....| ::|.|||.|
Frog   113 AIPIDDASKSSGAFYKARTFTGRGYKLG-----NSSKRELEYIQGEEPFEQGQEIQILLKLWSNG 172

  Fly   168 FSLDDGSLRLYALPENERFLRAILRGDFPEEMLRV---PRVQLSVQDHTNESY--RHLSRKQFMG 227
            ||||||.||.|:.|.|..||.::.:|:.|.|:.|:   .:|.|.::||.::.|  ..|..|.|.|
Frog   173 FSLDDGELRSYSDPINAEFLESVKKGEIPVELQRLIHGGQVNLDMEDHQDQEYVKPRLKFKAFSG 237

  Fly   228 PGRPLNSPSPQILVVGPMPVEAQ------GLQLNERADTTTVQLRMADGSRVAGRFNLTHNVGDL 286
            .|:.|.|.:|:|:.....|.|..      .:.|:|...||.:|:|:|||:|:..||||:|.:.|:
Frog   238 EGKKLGSLTPEIISTPSSPEEEHKRFLNAEVDLDEHVPTTKIQIRLADGTRLIQRFNLSHRIMDV 302

  Fly   287 YQYARLARPEFSDRSFVLMTAFPRQELVESDTRTLVQANLCNVVVIQHL 335
            ..|...||.:|:...|.|:|.||..||.: :::||.:|::.|.|::|.|
Frog   303 RHYIIHARSDFAQCDFALVTTFPFVELTD-ESQTLEEADILNTVILQRL 350

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG42383	NP_523847.2	UBA_TAP-C_like	10..39	CDD:270459
		SEP	155..242	CDD:197786	37/92 (40%)
		p47_UBX	257..336	CDD:176365	32/79 (41%)
ubxn2b	XP_004915243.2	SEP	160..252	CDD:197786	37/91 (41%)
ubxn2b	XP_004915243.2	Ubiquitin_like_fold	270..351	CDD:421700	34/82 (41%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1175850at2759
OrthoFinder	1	1.000	-	-		FOG0001623
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR23333
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.110