DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42383 and ubxn2a

DIOPT Version :9

Sequence 1:NP_523847.2 Gene:CG42383 / 37897 FlyBaseID:FBgn0259729 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_003200800.2 Gene:ubxn2a / 100537478 ZFINID:ZDB-GENE-110411-202 Length:258 Species:Danio rerio


Alignment Length:308 Identity:78/308 - (25%)
Similarity:133/308 - (43%) Gaps:95/308 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EAVSKKQEPEKSSEHSQANESNRDLHSLLSEISRRKEGDHDGYQACASDSSTDHDTPAGKRVNIN 106
            |....::|.|:..|.:....|:..:..||.|:.:        ..:.||         :||:|.| 
Zfish    18 EGAQNEEEEEEEDEEASPIRSSFSVEDLLDEVEK--------ISSVAS---------SGKKVEI- 64

  Fly   107 SSTPAITNNDSDRSLRVWGHGNRLGSAHPINPPPRSATEDSDTEPADDEHTIVVLHLWSEGFSLD 171
                                                                 |:.||..||:|:
Zfish    65 -----------------------------------------------------VVRLWKNGFTLN 76

  Fly   172 DGSLRLYALPENERFLRAILRGDFPEEM---LRVPRVQLSVQDHTNESYRHLSRKQ----FMGPG 229
            |..||.|...||:.||.||.:|:.|.|:   .....::::|:|..:|.|  :.:|:    |.|.|
Zfish    77 DEDLRSYTQEENQEFLEAIKKGELPLELEGRAEDEELEVNVEDMKDEVY--VPKKKIFHPFTGRG 139

  Fly   230 RPLNSPSPQILV---------VGPMPVEAQGLQLNERADTTTVQLRMADGSRVAGRFNLTHNVGD 285
            ..|.|.:|:::.         .|| ||.|  ::|||....|::|:.:|||.|:..||||.|.:.|
Zfish   140 YRLGSVAPRVVARSRSIHEDCSGP-PVPA--VELNEDLPVTSLQIWLADGRRLVQRFNLCHRISD 201

  Fly   286 LYQYARLARPEFSDRSFVLMTAFPRQELVESDTRTLVQANLCNVVVIQ 333
            :.::...|  :.:|..|:|.|:.|.:||.: :.::|.:|:|.|.|::|
Zfish   202 VQRFVEQA--QITDTPFILTTSLPFRELTD-EAQSLEEADLANAVIVQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42383NP_523847.2 UBA_TAP-C_like 10..39 CDD:270459
SEP 155..242 CDD:197786 30/102 (29%)
p47_UBX 257..336 CDD:176365 26/77 (34%)
ubxn2aXP_003200800.2 SEP 66..139 CDD:285322 25/74 (34%)
UBQ 175..247 CDD:294102 26/75 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1175850at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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