DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerT and slc6a4a

DIOPT Version :9

Sequence 1:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:627 Identity:323/627 - (51%)
Similarity:423/627 - (67%) Gaps:31/627 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GRSNPAPWSDDK------ESPNNEDDSNEDDGDHTTPAKVTDPLAPK-----------LANNERI 64
            |.....|.|.:.      ..|..:..|....|..:...:.|.|.:||           .....|.
Zfish    15 GEQQKVPESQENGRLVVDSVPEKDQKSGSGPGQVSNGYRSTSPQSPKEGAGTGTDRVNTPGTFRT 79

  Fly    65 LVVSVT--ERTRETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPL 127
            |||..|  :..||||.:|.:|||:|||:|||||||||||||||||||||||:||.|..:|||:||
Zfish    80 LVVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPL 144

  Fly   128 FYMELALGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPW 192
            ||||||||||||.||:||||.:||..||:|:|||:|.:|:..|||||:.||:|||.:||.:.|||
Zfish   145 FYMELALGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRATLPW 209

  Fly   193 TSCDNPWNTENCMQVTSE----NFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFG 253
            |:|:|.|||.||....|.    ::|..:.|||:||:.|:||:.:...||..:|.|...||||:..
Zfish   210 TTCNNRWNTPNCTHYLSTDLNVSWTNNSISPAEEFYVRQVLQVHLSPGLHQLGWVSWQLALCLLF 274

  Fly   254 VFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVW 318
            :|.:||||:||||:::||||||||..||:||:|||:||.:||||..|:.:||.|:|.||..:.||
Zfish   275 IFTVVYFSIWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGVVFYLKPDWKKLLTTTVW 339

  Fly   319 IDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQK 383
            :|||:|||||||||||.|||.:|||.|:||||:|||||||:|||||||:|||||:||||||.:::
Zfish   340 LDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRQ 404

  Fly   384 TSIDKVGLE-GPGLVFIVYPEAIATMSGSVFWSIIFFLMLITLGLDSTFGGLEAMITALCDEYPR 447
            ..::.|..: ||.|:||:|.||||.|..:.|::||||||:|.|||||||.|||.:|||:.||:|.
Zfish   405 QGVETVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPH 469

  Fly   448 VIGRRRELFVLLLLAFIFLCALPTMTYGGVVLVNFLNVYGPGLAILFVVFVEAAGVFWFYGVDRF 512
            ::.||||.|||.|:...:|.||.|:||||..:|.....|..|.|::.|||:|...|.||||..||
Zfish   470 LLARRREWFVLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRF 534

  Fly   513 SSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEMLGEEYYYPDWSYQVGWAVTCSSV 577
            .:||:.|||..||||||:||..|.|.|||.|.:..:....|:...:|.||.|:..:|:.:..||.
Zfish   535 CNDVQLMLGFAPGLFWRVCWIAICPCFLLFIIVSFLAFPPEVKLFDYLYPFWTTVLGYCIGVSSF 599

  Fly   578 LCIPMYIIYKFFFASKGGCRQRLQESFQPEDNCGSVVPGQQG 619
            :|:|.|::| ....:||..:|||.:...||      .||..|
Zfish   600 ICVPSYMVY-HLVTTKGTFQQRLLKGITPE------APGSSG 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 303/537 (56%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:294310 303/537 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 671 1.000 Domainoid score I140
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 682 1.000 Inparanoid score I681
OMA 1 1.010 - - QHG53371
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000975
OrthoInspector 1 1.000 - - otm26087
orthoMCL 1 0.900 - - OOG6_101590
Panther 1 1.100 - - LDO PTHR11616
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4270
SonicParanoid 1 1.000 - - X639
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.910

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